Rhincodon typus (whale shark): 109938448
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Entry
109938448 CDS
T06055
Symbol
rubcn
Name
(RefSeq) run domain Beclin-1-interacting and cysteine-rich domain-containing protein isoform X1
KO
K19330
run domain Beclin-1 interacting and cysteine-rich containing protein
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109938448 (rubcn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109938448 (rubcn)
Membrane trafficking [BR:
rtp04131
]
Autophagy
Other autophagy associated proteins
Others
109938448 (rubcn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUBC_PIKBD
RUN
Motif
Other DBs
NCBI-GeneID:
109938448
NCBI-ProteinID:
XP_048460748
LinkDB
All DBs
Position
13:complement(26684609..26748040)
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AA seq
1013 aa
AA seq
DB search
MLAMFVSGSRCLKHSETASRRWKGEAGQLLRPAGWYPEELPCERLGLKARQEQWKLLGGL
KTTVEGLLSTNNPNVWSKYGGLERLCKDMNKILCHGLLEDEVYSQHKDYWQFITDCHWVS
PSLVHHTVQIMENDAHCVPKSNPQKAQYWLHHSLQFHSLSSQLRSLLSNCEYTRKFYKDT
AFLLSNPHVTAMFQCLEAVEQNNPKMLAQIDTSVFARKCNSPLPMMKSQSLTALPGTKCM
PSGGECQTRHTTSYNNLLARCTNLNVSGGAPQDFITVNNTQQALKKRANLTFFPDSTDKP
ALDQYSGVHQFRDITSMEPFSPVSETTISTPVSHSEDSSAEVQDEGSSEMDDGPEYLAIG
NLGRRDRSSSQCSNSSSSCSGGSQTLVPSAWQVPKITVSCSESLLNLPRRSSFSETQNLE
RQASFKKSHSRSHSDTGIATTKTSESHLGVRNLKENSPFSARSCQISSPISPYLEAEGTH
CTHSSDGMFRRPSQGQSLISYLSEQDFGSCADLEKENAHFSISESLIAAIELMKCNLMKK
QIMDDEDEDSDKEIRELKQKIRIRRQQIRTKNLLPGLRSTESDTCTTESGSPISSRDSAP
LSDSGSTDGVDEFELKDCIDESNLIHMSANGLSASMASLFSDADIRKSLASRSKSAISSE
SITFSVLHSNSAEAVAMGLLKQFEGMQLPAASELDWLVPEHDAPQKLLPIPDSLPVSPDD
GEHADIYKLRIRVRGNLEWAPPRPQIIFNIHPPPKRKVVVVKQNYRCAGCGIKVEPDYIK
RLRYCEYLGKYFCQCCHENVQSVVPSRILRKWDFSKYYVSNFSKDLLNKIWNDPLFNVQD
INNALYRKVKSLDQIHMLRIQLVHMKNLFKTCRLAKQLLDNFDTEPGHLTEDLHLYSLND
LTAVKKGELAGRLKELVKIGAAHVESCMLCQAKGFICEFCGDGTDIIFPFELHKCKRCEE
CKACYHKSCFKSDQCPRCDRLQARKELLAKQTIELYLESEGEEESSSQSTSCD
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgttggccatgtttgtgtccggaagccggtgtctaaaacacagcgaaacagcttcgcgc
cggtggaagggagaggcggggcagttgctgaggccggctggttggtatccagaggagtta
ccatgtgagagattgggcttaaaagcaagacaagaacagtggaaacttttgggaggcctg
aagaccactgtggaagggctgctgtcaacaaataaccctaatgtctggtctaagtatgga
ggattggagcgtctctgcaaggatatgaacaagattttgtgtcatggactcctggaggat
gaggtatattcacagcataaagattattggcaatttataactgattgtcactgggtcagc
cctagccttgttcatcatactgtgcagattatggagaatgatgcacattgtgtcccaaaa
agtaatccacagaaagcccagtactggctccaccacagccttcagttccattctctctca
tcacagctaaggtcattgctcagcaactgtgaatacactagaaaattttacaaagatact
gcttttctgttgagcaatccccatgtgactgctatgtttcagtgtttggaggctgtggaa
cagaataatcctaaaatgttagctcagattgacacatccgtgtttgcaaggaagtgtaac
tccccgttaccaatgatgaaaagccaaagtctgactgctcttcctggaaccaagtgcatg
ccctctggaggggaatgccagacaaggcatacgacctcatataacaacctcttggctcgt
tgtactaacttgaatgtttcaggtggtgcaccacaggatttcattactgtcaataatact
cagcaagcgttaaagaagagggctaatttgacattttttcccgattcaacggataaaccg
gcattagatcagtactctggcgtccaccagtttcgtgacatcacttctatggagccattt
tctccagtcagtgagacaactattagtaccccagttagccatagtgaggattcttcagct
gaagtacaggatgagggatcaagtgaaatggatgatggaccagagtatttggctattgga
aatctgggacggagggatcgcagttcaagccagtgcagtaatagctcctcctcttgttct
ggcggttcacagacactagttccttctgcctggcaggttcctaaaatcaccgttagctgt
agtgaatctctgctgaatcttccgagacgttccagcttctcagaaacccagaatctggaa
cgacaggctagtttcaagaagagccatagccgatcccattctgatactggtatagcaaca
accaagacatccgagtcacacctgggagtcagaaacctgaaggaaaacagtcctttctca
gctcggagttgtcagatcagttctcctatctctccctacctggaagctgagggtacccat
tgcacacacagttctgatggaatgtttcgccggccatcacagggccagtctctgatcagc
tatctatcagaacaggactttggaagttgtgcagatttggaaaaggagaatgcccatttc
agtatctctgaatcactgattgctgccattgaactaatgaagtgcaacctgatgaagaaa
cagatcatggatgatgaagatgaggatagtgacaaagaaataagagaactaaaacagaaa
attcgtattcgacgacagcagatccgtacaaaaaacctcctgcctggattgaggagcact
gagtcagacacctgcaccacagaaagtgggtcccctatcagctcccgtgattctgcgcca
ttatcagattctggatctactgatggagtggatgaattcgaattaaaagattgtattgat
gagtcaaacctcattcacatgtcagcgaatgggctctcagcatcaatggcatcattgttt
tcagatgcagatattagaaagagtttagcttcaaggagcaaatcagcgatcagctcagag
tccattacattctcagtccttcattccaactcagctgaggcagttgccatgggcctgcta
aaacagtttgaggggatgcagcttcctgctgcctctgagctagactggttggttccagag
cacgatgctcctcagaagcttttgccaattccagactctcttccggtatctcccgatgat
ggtgagcatgctgatatttacaaactgcgaattagagtgcgaggaaatttagaatgggct
ccacctcggcctcaaatcatcttcaacattcacccaccgcccaagagaaaggtggttgtt
gtcaaacaaaattaccgctgtgcaggatgtggtatcaaagtggagccagactacataaag
agactacggtattgtgaatatctggggaagtatttctgtcagtgctgtcatgagaatgtc
cagtcggtggttccaagccgcatattgcggaaatgggatttcagcaagtattatgtcagt
aacttttccaaggatttgctgaataaaatatggaatgatccactcttcaatgttcaggac
attaacaatgctttatatcgaaaagtgaagtctctggatcaaatccatatgttgagaatc
cagcttgttcacatgaagaatttattcaaaacatgccggttggcaaaacaactcttggat
aactttgacacagaaccaggtcaccttactgaggatcttcacttgtattcactaaatgat
ctcactgctgtgaagaaaggggaattggctggtaggttgaaggaacttgtgaagatagga
gcagcacatgtggagagctgcatgctttgtcaggcaaaaggcttcatctgtgaattctgt
ggtgatggcactgatattatctttccttttgaactgcacaaatgtaaacgatgtgaagaa
tgtaaagcgtgttatcataagtcctgctttaaatcagatcagtgtccccgctgtgaccgg
ttacaggcacgtaaagaactccttgccaaacagaccatagaattgtatttggagtcggaa
ggtgaagaggaatcgagttcacagagtacaagttgtgattga
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