Rhincodon typus (whale shark): 109938457
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Entry
109938457 CDS
T06055
Name
(RefSeq) transmembrane channel-like protein 7
KO
K21988
transmembrane channel-like protein
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
109938457
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtp02000
]
109938457
03037 Cilium and associated proteins [BR:
rtp03037
]
109938457
Transporters [BR:
rtp02000
]
Other transporters
Pores ion channels [TC:
1
]
109938457
Cilium and associated proteins [BR:
rtp03037
]
Other cilia and associated proteins
Stereociliary proteins
109938457
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
SRTM1
C3orf18_N
Motif
Other DBs
NCBI-GeneID:
109938457
NCBI-ProteinID:
XP_048465793
LinkDB
All DBs
Position
21:997545..1101322
Genome browser
AA seq
715 aa
AA seq
DB search
MQLEKPSPSKSRTSGFFLSLNPLLHELPSYQSLIRRTSAGKGSTKRRNTVPSYLFTSLTH
RRTGSDELEQNIGPLREMPVSIEEKKRIRASPDYQTYMLTKYDQGRLFRKRARFIQTVKE
RLSSLYLWKTDIHDIEGKFGTGIRSYFSFLRFLVLLNFVIFLLMFTLVTLPTIISKHQVV
NTTYAEVPSSVVAQECTVYEQPKTKLVLFYSYVINLFSGTGFLEQTYLFYGFYKFDYLSS
GNFHYNLSLAYFMATCFYILLSLFWVVKRAVEGFKQSFIRSEDRFQSFCNKIFAGWDFCI
TDQHAAELKHSSLQYELKTDLNEERMKQKIADRTKKEKFRIYLLRVFLNLVVVMILFICF
YCIYETTVFSQKANKRAGHVEAFTSDLVVEYLPSIVITAANFITPRLFERIIQFEDYSPA
FEIKFILIRSVFVRLANIIVLLLSLWSQITTCDDDACKPCGYNNKLYPCWETRIGQEMYK
LMIFDLIIISSVALFVEFPRKLIVTYCTWAPFKWWGQQQFSVPQNVLEIVYGQTICWIGT
FYSPLLPGIATIKYFIIFYIKKISLMNNCRPSTRPFRASSSNFFFLAVLLIGLPLACVPI
VFSVGVIKSSKSCGPFVKYNISWHVIPATIDRFPKGFNKLLYGLASEAFAVPFFLFVCLI
LFYLVALAGAHKRVIDQLREQLAMHGRDKQYLIKKLTRDSLHLKNRSTTSTIQEN
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgcagttggagaagcccagcccttcgaagagcaggaccagcggcttcttcctttctctc
aacccactcttacatgaattgcccagttatcaatcgctaattcgaaggacttcagctggt
aaaggttcaaccaaacggagaaacacggtccccagttatttgtttacttcactaactcat
agaagaactggttcagatgagttagaacagaacattgggccattgcgagaaatgcctgtt
agcattgaagagaagaagcgaatcagagctagtccagattatcaaacatacatgttaaca
aaatacgatcaaggccgtctatttagaaaaagggcaagatttattcaaactgtcaaggag
cgtttatccagcctgtatctttggaaaacagacattcatgatattgaaggcaaatttggc
actggaatccgatcttacttttcctttcttcgttttctggttttgttgaattttgtgata
tttcttttaatgtttacccttgtcacacttccaaccatcatttcaaagcaccaagttgtt
aacactacatacgccgaagttccatcctctgtagtagctcaagaatgcacagtgtatgaa
cagcctaaaaccaagcttgtccttttctatagttacgtgattaatcttttctcaggaaca
ggattcttggagcagacatatctattttatggattttataaatttgattatttgagttct
ggcaattttcactataacctatcacttgcatacttcatggcaacgtgcttctatatccta
ttgagcttattctgggtagtgaaaagggctgtggaaggtttcaagcaaagcttcataaga
tctgaagatcgatttcagagtttttgtaataagatttttgctggttgggacttttgcatc
actgaccagcatgctgcagagctgaagcatagcagtctccagtatgaactgaaaactgac
ttgaacgaagaaagaatgaaacagaagattgctgataggacgaagaaggaaaagttcaga
atctacctcttgagagttttcttgaatttggtagttgtaatgatattgttcatttgtttt
tactgcatttacgaaactactgttttctcacaaaaagctaataaaagggcaggtcatgtt
gaagccttcacatccgatctagtagttgagtacctgccatctattgttataacagcagct
aactttatcacaccacgtctgtttgaacgaataattcaatttgaagactattcaccggcc
tttgagataaaatttattcttattaggtcagtgtttgtgcgattggctaatatcattgtt
cttttgctgagcttgtggtcacaaatcacgacttgtgatgatgacgcgtgcaaaccatgt
ggctacaacaacaaattgtatccatgctgggaaacccgaataggacaagaaatgtacaag
ttaatgatatttgacttgataataatttcatcagttgcattgtttgtggaattccccaga
aagttaattgtaacatattgcacatgggccccattcaagtggtggggtcaacagcagttt
tcagttcctcaaaatgtgttagaaattgtgtatggtcagactatctgctggataggaaca
ttttactccccattgctccctggaatagcaaccatcaaatacttcatcatattttatatc
aaaaagatatctctgatgaacaactgtcgcccttccaccagaccttttcgggcatcaagc
tctaacttcttctttctggcagtgctgttaattggacttcccttagcctgtgtgcctatt
gttttcagtgttggagtgatcaaatcatccaaatcttgtgggccatttgttaaatacaat
atatcatggcatgtcataccagcaaccatcgaccgtttccccaagggctttaacaaactt
ctgtatggtttggcatctgaggcttttgcagtgccattctttttatttgtatgccttatc
cttttctatctggttgcgttggctggagcacataaacgagtcattgatcagttgagagaa
caactggctatgcacggtcgtgacaaacagtaccttatcaaaaaactgactagagattca
ctccatttgaagaacagatctaccacgtctaccattcaagaaaactga
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