KEGG   Rhincodon typus (whale shark): 109938489
Entry
109938489         CDS       T06055                                 
Name
(RefSeq) ras-related C3 botulinum toxin substrate 1-like
  KO
K04392  Ras-related C3 botulinum toxin substrate 1
Organism
rtp  Rhincodon typus (whale shark)
Pathway
rtp04010  MAPK signaling pathway
rtp04145  Phagosome
rtp04148  Efferocytosis
rtp04310  Wnt signaling pathway
rtp04370  VEGF signaling pathway
rtp04510  Focal adhesion
rtp04520  Adherens junction
rtp04530  Tight junction
rtp04620  Toll-like receptor signaling pathway
rtp04810  Regulation of actin cytoskeleton
rtp05100  Bacterial invasion of epithelial cells
rtp05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    109938489
   04310 Wnt signaling pathway
    109938489
   04370 VEGF signaling pathway
    109938489
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    109938489
   04148 Efferocytosis
    109938489
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    109938489
   04520 Adherens junction
    109938489
   04530 Tight junction
    109938489
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    109938489
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    109938489
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    109938489
   05100 Bacterial invasion of epithelial cells
    109938489
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rtp04131]
    109938489
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rtp04147]
    109938489
   04031 GTP-binding proteins [BR:rtp04031]
    109938489
Membrane trafficking [BR:rtp04131]
 Exocytosis
  Small GTPases and associated proteins
   Rho GTPases
    109938489
 Endocytosis
  Lipid raft mediated endocytosis
   Arf6-dependent endocytosis
    109938489
  Macropinocytosis
   Ras GTPases
    109938489
 Others
  NADPH oxidases (Nox) and associated proteins
   Nox associated proteins
    109938489
Exosome [BR:rtp04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   109938489
  Exosomal proteins of other body fluids (saliva and urine)
   109938489
  Exosomal proteins of colorectal cancer cells
   109938489
  Exosomal proteins of bladder cancer cells
   109938489
GTP-binding proteins [BR:rtp04031]
 Small (monomeric) G-proteins
  Rho Family
   Rac/Cdc42 [OT]
    109938489
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU
Other DBs
NCBI-GeneID: 109938489
NCBI-ProteinID: XP_048473270
LinkDB
Position
37:complement(11124960..11154999)
AA seq 192 aa
MMQNIKCVVVGDGAVGKTCLLITYTTNDFPEEYIPTVFDNYSTSVTVDGRAVNLGLWDTA
GQEDYDKLRPLSYPQTDVFVICFSLVSPASFQNVRVKWYPEVKRHCPNAPIILVGTKLDL
RDDKETIEKLRGRNQAPITHEEGVQLAKEIGAAKFIESSAYKQKGLKTIFDEAIRAVIFQ
PVQKRRIPCCIL
NT seq 579 nt   +upstreamnt  +downstreamnt
atgatgcaaaatatcaaatgcgtggtggtgggtgatggagctgttgggaaaacctgcctc
ctcatcacttacacaaccaacgacttccctgaggagtacattccgaccgtctttgacaac
tactcgacctctgtgaccgttgacggtcgtgctgtgaacctgggattgtgggacacagcc
ggtcaggaagactatgacaagctccgacctctctcctaccctcaaaccgatgtttttgtg
atctgcttttcacttgtcagtcctgcttctttccagaatgtacgtgtcaagtggtaccca
gaagtgaaacggcactgccccaacgctcccatcatcctcgtgggcaccaagctcgactta
cgtgatgacaaagagaccatcgagaaactaagagggaggaaccaagcccccattacccac
gaagaaggtgtacagttagcaaaggagattggagctgcaaagtttattgaaagttctgcc
tacaaacagaaaggcctaaagacaatatttgatgaggccattcgagctgtgatcttccaa
cccgtgcagaagagaaggataccctgctgtattctgtag

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