KEGG   Rhincodon typus (whale shark): 109938631
Entry
109938631         CDS       T06055                                 
Name
(RefSeq) transportin-3-like isoform X1
  KO
K15436  transportin-3
Organism
rtp  Rhincodon typus (whale shark)
Pathway
rtp03013  Nucleocytoplasmic transport
rtp03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    109938631
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    109938631
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rtp03016]
    109938631
Transfer RNA biogenesis [BR:rtp03016]
 Eukaryotic type
  tRNA transport factors
   tRNA import factors
    109938631
SSDB
Motif
Pfam: TPR_TNPO3_IPO13_4th TPR_TNPO3_IPO13_2nd TPR_TNPO3_IPO13_3rd Xpo1 DUF1759
Other DBs
NCBI-GeneID: 109938631
NCBI-ProteinID: XP_048473383
LinkDB
Position
37:complement(12285610..12337706)
AA seq 921 aa
MEGEVTLDSVYQAVQALYHHPDPQGKERASAWLGEFQQSMFSWQISDQLLRLQRDIESCY
FAAQTMKMKIQYSFYELPPEMHSSLRDSLLTHLECLKDLSQAIVTQLALAVADLAIQMTS
WKSCVQTLIEKYGNDESALPFLLEILTVLPEEVHSPSLRIGTNRRTEVIEDLAYNASMVI
ALLTAYVERCSHDEKLVIKVFRCLMSWINLGILHNDHIANSQLLVALFQVLRHNQTSSNL
HEVASDCVCAALYAVEGLQESLQLALQLQEGVTALEEAYHTAVACEDMDKALNYCRIFTE
LAETLLEMVIRSPGQGLGDLKTLNLILNCVGHEQYEVAEITFNFWYRLAETLHRMKDPSV
NQIFRPYFQRLTQSLTFHSQMDPDHEGVLDETDDFYEFRLRVSDLLKDIIFLIGASEFFS
QLYSTLKDGSPAWEETEAVLFIMTALVKNLNPEKEQRLGNVVQAVISLPDNTHLAVQHSG
VQLLGEMGEYINSVRCLELVLNFLTQRLKQKELANAAANSIQNICAMCSDAMTRHIDGLL
QVASSLDALPISYDSSIGILRGISLVLARMPSDKIEETFHRLCSMQVTALKKLLTSEQTN
GISADPAIWLDRLAAIFRHTNATVGEGRPHPCQKVIQEIWPVISETLYRHQADNRMAERC
CRCLRFAIRCVGKGSAMLIQPLVSQMVSVYQSHQHSCFLYLGSILVDEYGSEESCTQGLL
EMMQAFCGPTFQLLEQPRGFQNHPDTVDDLFRLATRFIQRSPVVLIQSPVMSLIIRCALT
ATTLNHRDANSSVMKFLQDLVHVATINKHKEDFELRKNLVHGFLGESGALLVAQLVQACC
FYLVPSMLGNVADVMWELRIFDRKTFCGWLEDALKALPKELSAGAITATEKQMTEFHKQV
MCAEDATMIGWSLMEFSGFYR
NT seq 2766 nt   +upstreamnt  +downstreamnt
atggaaggggaggtcactttagattcagtctatcaagctgttcaagctttgtaccaccat
ccagacccacagggtaaagagagggcctcagcctggctgggtgaattccaacaatcgatg
ttttcatggcagatctctgaccagctgctgcggctccagcgtgacatcgagtcatgctat
tttgctgcccaaacaatgaagatgaaaattcagtattcgttttatgagctacccccagag
atgcactcctcactccgcgattctttgctcacgcacctggagtgcctgaaggatctgtcc
caggccatcgtcacacagctggctcttgctgttgcagacctagccatacagatgacatca
tggaaaagctgtgtccaaacgctaattgagaagtacggcaatgacgagtctgcactccca
ttcctgctggagattctgacagtgctcccagaggaggtgcacagcccctcgctacgaatc
ggcaccaaccgaagaactgaggtcattgaagacttggcctacaatgccagcatggtaatc
gccttattgacagcctacgtggagcgctgtagtcatgatgagaagttggtaattaaagtc
ttccgatgcttgatgagctggattaacctgggcatcctgcacaacgatcacatcgctaac
agccagttactggtggcactcttccaagtacttagacacaaccagacgtcctccaacctg
cacgaggttgcgagtgactgtgtatgcgcagcactttatgcagtcgagggcttgcaggag
agtctacagctggcattacagcttcaagaaggggtgacagcactggaagaagcctaccac
actgcagtcgcctgtgaggacatggacaaggcactgaactattgccggattttcactgaa
ctggcagaaacgctgttggagatggttatccgttcaccaggacagggattgggtgacctc
aaaacgctgaatctcatcttaaactgtgttggacatgagcagtatgaggtggcggaaatt
acattcaacttctggtatcggctggccgaaactctgcacaggatgaaggacccctcagtg
aaccagatcttccggccttatttccagagactgactcagtcgctcaccttccactcccag
atggaccctgatcacgagggagttctggacgagacggatgatttttacgaattcagactc
cgggtctccgatcttctgaaagatattatattcctcattggagcttcggagttcttctca
caactgtattcaacactgaaagatggcagcccagcctgggaagagactgaagctgtgctt
ttcatcatgactgcattggtgaaaaacttaaacccggaaaaggaacaaaggctgggaaat
gttgttcaggcagtaatcagcctccctgacaatactcatctagcggtacaacattctgga
gtccagctgttgggtgagatgggcgaatacatcaacagtgtgcgatgtctagagctggtg
ctaaatttcctaacccaacgcttgaaacagaaggaattagcaaatgcagctgccaactcg
atccagaacatctgtgccatgtgcagcgacgcgatgacacggcacattgatggtctgctg
caggtcgcctcatccctggatgccctccctatttcttacgactcctccatcggtattctg
cgaggcatctccttggtattggctcggatgccatcagacaaaatcgaagagaccttccac
cgcctttgttccatgcaggtcactgctctaaagaaactgctgacatctgagcagaccaac
ggcatctcagcagacccagctatatggttggatagactggcggcaatattcaggcataca
aatgcaacagtgggagaagggaggccccacccctgccagaaagtcatccaggagatctgg
ccagtgatttctgaaacgctgtataggcaccaagcagataataggatggcagagcgttgc
tgtcggtgtctgcgttttgcaatcagatgtgtgggtaaaggatccgctatgttgattcag
cccctggtgtctcagatggtgagtgtgtaccagtcccatcaacactcctgcttcttgtac
cttggcagtattctggtggatgagtatggcagtgaggagagttgcacgcaaggcctgctc
gagatgatgcaggcattttgtgggccaacattccagctgctagaacaacctagaggtttt
cagaatcatcctgacactgtggatgacctttttcgcttggcaacaagattcattcagcga
agtccagttgttttgatccaaagtccagtgatgtccttaatcattcgatgtgcattaaca
gcaacaacactgaaccaccgtgatgccaactctagtgtgatgaagttcctacaggatctg
gttcatgtagcaacaatcaataagcacaaagaagattttgagctccggaagaacctggtc
catggatttcttggagagagcggagcactgcttgtggcacagcttgtgcaggcatgctgc
ttctaccttgtaccgagcatgctgggcaacgtggctgatgtcatgtgggaactccgcatt
tttgaccggaagacattctgtgggtggctggaagatgctctcaaagccctcccgaaggaa
ctttcggctggagctattacagctacagagaagcagatgacagagttccataaacaggtc
atgtgcgctgaagatgctacaatgataggttggtccctgatggaattctctgggttctac
aggtaa

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