Rhincodon typus (whale shark): 109938857
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Entry
109938857 CDS
T06055
Symbol
lrrk2
Name
(RefSeq) leucine-rich repeat serine/threonine-protein kinase 2
KO
K08844
leucine-rich repeat kinase 2 [EC:
2.7.11.1
]
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
rtp01001
]
109938857 (lrrk2)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109938857 (lrrk2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtp04147
]
109938857 (lrrk2)
Enzymes [BR:
rtp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
109938857 (lrrk2)
Protein kinases [BR:
rtp01001
]
Serine/threonine kinases: TKL group
LRRK family
109938857 (lrrk2)
Membrane trafficking [BR:
rtp04131
]
Exocytosis
Calcium ion-dependent exocytosis
Kinases and associated proteins
109938857 (lrrk2)
Exosome [BR:
rtp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
109938857 (lrrk2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_LRRK2
Pkinase
PK_Tyr_Ser-Thr
Roc
COR
LRR_8
Ras
LRR_4
LRR_14
Beta-prop_EML_2
Arf
WDR55
GTP_EFTU
ATP_bind_1
LRR_9
WD40_CDC20-Fz
Beta-prop_RSE1_2nd
G-alpha
LRR_NXF1-5
ABC_tran
LRR_13
Beta-prop_HPS5
Beta-prop_BBS7
NACHT
Gtr1_RagA
nSTAND3
AAA_22
AAA_16
MMR_HSR1
cobW
MobB
PduV-EutP
T2SSE
Septin
AAA_7
LRR_6
AAA_29
Motif
Other DBs
NCBI-GeneID:
109938857
NCBI-ProteinID:
XP_048466530
LinkDB
All DBs
Position
22:14917894..14988954
Genome browser
AA seq
1590 aa
AA seq
DB search
MTSSLDDVEPAVNPRQRSISHVIHKPDCASKRSSFGSGNDHWLQHATEIEFIWSLDLSAN
DLEHLNSINHTCCIAPHLEQLQKMDLSQNNLTSFSQHFCTILKCLTDLDMSNNKFTSFPS
CVLEMQSIMSLDISRNSIGHSLTLNSTCPTLKKLNLSQNQLSSFPESLDKATENLEELLL
KGNKMRTLVSSLCLAELNLLDLSQNCISNILDTFLMQCSKLDTFRVSENHLSTLSGLPSK
ITTIDLASNKFDRVPEAVLKLQHLRSVNLSHNNISELPGPLFWESSSLRELIFSHNQISV
LDLSEGVNKWSRLEKLNLNNNKLKELPPQIGLLENMMSLLLSNNSDLRSLPNEMGKLHKL
WELELQGLFLDLDLKHVGSKTKDIIRFLHQRLKKAVPYYRMKLMIVGNAGSGKTTLLQQL
MKCKQPNSGLEKATIGIDVKEWPIHVKEKKGKRKEYMLSVWDFAGQEEFYSTHPHFMSPR
ALYLVVYDLSKGVGEIDAIKHWLFNIKACASSCPVILVGTHVDMTDEKHQKSCISKIKME
FLQQHDFPPIRDYHFVVATEESDSLLKLRRAIISEIQTFKIRDQLVMGQLIPRSYMELEK
RIIQERKTVLSEFPVIHQQRLLEIVQENHLQLDENELPHAVHFLNESGVLLHFHDPALHL
RDLYFVDPQWLCKMMAQIVTVKAASFPKHPCGIIYRSDVENFLSQKHSFPQNYISQYIKL
LEKFQLALPLGEEQLLIPSSLPDQRPVIELPHCENSELIVRLYAMPYFPMGFWSRLINRL
LEVSSCMLGRQDREKPLRPNRTYWRQGVYLIWSSEAYCLVDSAVLDNKPESVLKITVPCC
RKGFVLMGQIVDHIDSLLEEWFPGLLETDIIGEGGTLLKKYALYSFEDDQECQQILLDDL
LDIAKEGDFLTCPTDRSNKVSISRVAPDLVLVDLPRHIMLDVNHLELEQTPDVLLGDGGF
ASVYRATYKCEEVAVKIFNKHVSQMHLHRLLRQELAILSYLHHPSLVSLLAADFRPRMLV
MELAPKGSLDILFNKEKDHLTQPLRHRIALHVADGLRYLHSSMIIYRDLKPHNVLLFSLN
PNSAIIAKIADYGIAQYCCRMGIKSSEGTPGFRAPEVAQGNVIYNHQADVYSFGLLLYDL
ITNGERISYGMKFPNDFDEMAIQGKLPDPVKEFDCAPWPAVQSLIDDCLKQNPEDRPTAS
QVYETLNSVELHCLKRRMIVPGNLTADCMVATSSVCKKPSVWIGSGQQDKAQLSCLELDT
DGQAVVNIEDNRILCLALVCVIDEQVNWVVAGTQSGHLWIVNTENVKSVHQLRKMSDSIT
CLYCTHDLKQSKEDNFLLVGTADGKLAIFKDTTVKYQDGAPLKVVDIGDISTPLVCLSIS
PTSELIAFWASCGTKIISLSSNFTVQKVIDTNTRTLSQKYHSDGNIITMVIDKYIYLAKK
DSHVVELWDKKLYKMSMSIDCASILKNETYSARVKALYLQKTSTLWIGTGGGDVVLLDLS
THQPIWVIEKFCHSIRSMVPAQIEKGHLRTVMLILGNVCIDYNENDKQQSELQSQLFVWD
LNLPYEIQSLKKHTDMRREITEKMRLGSLE
NT seq
4773 nt
NT seq
+upstream
nt +downstream
nt
atgaccagttcacttgacgatgttgagcctgcagttaacccaagacagagatctatttct
catgtaattcataaaccagattgtgcatcaaaaagatcttcttttggaagtgggaatgac
cactggttgcagcatgctactgagatagagttcatctggtccttggatctttctgcaaat
gacttggagcacctaaactccatcaatcacacatgttgtattgctccacaccttgaacaa
ctacaaaagatggatttaagtcaaaataacttaacaagtttctcacaacatttctgtact
attctcaagtgtctgacagatttggatatgagcaataacaagttcacctcttttccatca
tgtgtactggaaatgcagtccattatgtcccttgatatctccaggaacagcattggccat
tctctgaccttgaactccacgtgcccaaccctgaaaaaattgaatttgtcacaaaatcaa
ctctcctcttttccagagtctcttgataaagccacagaaaatttagaagaactattactt
aaaggaaataaaatgaggacacttgtatcatcactgtgtttggctgagcttaatctacta
gatcttagtcaaaactgcatctccaacattctggatacatttttgatgcagtgctcaaag
ctagatacattcagagtctcagaaaatcatctcagtacattgtcaggtttgccgtcaaag
atcactacaattgatttggccagcaacaagttcgacagagttcctgaagcagttctcaag
cttcaacatttaaggagcgtaaacctaagtcacaataacatatccgagcttcctgggcct
ttattttgggagtcttcaagtttaagggagctgatatttagccataaccaaatcagtgtt
ttggatttgagtgaaggagtgaataaatggtcaagactggaaaagctaaatctcaacaat
aacaagttgaaggagctaccacctcaaattggtctgctagaaaacatgatgtcattactc
ctgagtaataactctgacttgagatccttaccaaatgaaatgggaaagctgcataagttg
tgggagcttgaactacaagggctgtttctggatttggatttaaaacatgtgggcagcaaa
acaaaagatatcataagatttctgcatcaacgcttgaagaaagctgtgccttattacaga
atgaaacttatgatagtgggaaatgctggtagtggcaaaactacattgcttcagcagcta
atgaaatgcaagcaaccaaattcaggtctagagaaagccacgattggaattgatgttaag
gagtggccaattcatgtaaaagaaaagaaagggaagagaaaggaatatatgttgagtgtc
tgggattttgcaggccaagaagagttctacagcacgcatccccactttatgtctccgcga
gccctataccttgttgtctatgaccttagtaaaggagttggtgaaattgatgcaatcaaa
cattggcttttcaacataaaggcctgtgcctcatcttgtcctgtaattcttgtcggtacg
cacgttgatatgaccgatgaaaagcaccaaaaaagttgcatatccaaaattaagatggaa
ttccttcagcagcatgattttcctcccatccgtgattaccattttgtggtggccacagaa
gaatctgactctctcttaaaactgcgtagagctattattagtgaaatacagactttcaag
atcagagaccagctggtaatgggtcagctaattcctcgtagttatatggagttggaaaag
agaattatacaggaacgaaagactgttttatcagaattcccagtaattcatcaacaacgg
ctgctggaaatagttcaagagaatcatttgcaattggatgaaaatgagctgccccatgct
gttcatttcctcaatgagtctggtgtgctactgcattttcatgacccagctcttcaccta
cgggatctttattttgtagacccacagtggttgtgtaagatgatggcacagattgtgacc
gtaaaagcagcaagttttccaaagcatccttgtggaattatttatcgatcagatgttgag
aacttcctctctcagaaacacagtttccctcagaattacatatcccaatacataaagctt
ctggaaaagttccaacttgcattgcctttaggagaggaacaactacttattccaagcagc
ttacctgatcagagacctgtaatcgaactcccacattgtgaaaactccgaattgatagta
aggctttatgctatgccatattttccaatgggattctggtccagactcatcaataggcta
ctggaggtttcttcttgcatgcttggtagacaagatagagaaaaacctttacgtcctaat
agaacatattggcgacaaggagtctacctgatctggtcatcagaagcctactgcctggta
gactcagctgtattggataataaaccagaaagtgttctcaaaataactgttccatgctgc
aggaaagggttcgttttaatgggccagattgtagatcacattgattctctgctggaagag
tggtttccaggcctattggagacagatataatcggagaaggaggcactcttctgaagaaa
tatgctttgtacagctttgaagatgatcaagaatgccagcagattctactggatgactta
ctagatatagctaaagaaggggattttttgacttgtcctacagatagaagcaacaaggtt
tctatttcacgagttgctccagaccttgtgctcgttgatctacccagacatattatgctg
gatgttaatcaccttgagcttgaacaaacacctgatgttttgctgggtgatggaggtttt
gcatctgtctatcgggcaacttacaagtgtgaagaagtggctgttaaaatttttaataaa
catgtgtcacaaatgcatctacatcgtcttctgagacaagaacttgcaattcttagttat
ttgcatcatcccagtttggtctctctcttggcggctgactttcgaccgcggatgttggtg
atggaattggcacccaaaggttcgctggatatcttgtttaacaaagagaaagaccacctt
actcaaccacttcgacaccggattgctttacatgtggctgatggcttaagatatctgcat
tcatcaatgataatttatagggatttgaagcctcacaatgtactgctattcagtttgaat
cctaactctgctataattgccaaaattgctgattatggtattgctcagtactgctgcaga
atgggaatcaagagctctgagggcacaccaggatttcgagcaccagaagttgctcaagga
aatgtcatttataaccatcaggctgatgtttattcttttggattgcttttatatgatctg
attactaatggtgaaagaatctcttatggaatgaagtttccaaatgactttgatgagatg
gcgattcaggggaaattgccagatccagtcaaagaatttgactgtgctccgtggcctgct
gtccaaagtttaattgatgattgtttgaagcaaaaccctgaggacaggccaacagcttct
caggtgtatgagactctgaactcagtggagctacattgtttgaagagaaggatgatagtc
cctggtaatctcacagcagactgcatggtagctacaagctctgtttgcaaaaagcctagt
gtctggattggcagtggacaacaagacaaggcacaactctcgtgtttagaactggatact
gatggacaggctgttgtgaacattgaggataaccggattttatgcctggcattggtatgt
gtgattgacgagcaagttaactgggttgttgcaggcacacagtctggacatttgtggata
gtcaacacagagaatgtaaaatctgttcatcaacttcggaagatgtctgattctattact
tgtttgtattgcactcatgatttgaaacaaagcaaagaagacaatttcctattggtgggg
acagcagatggaaagcttgctatttttaaggatacaacagtaaagtaccaagatggtgca
ccactgaaggttgtggacattggtgacatcagtacccctttggtatgcttgagcatatca
cccacttcagaactgatagctttttgggcaagctgtggaacaaagatcatatcactcagc
agcaattttacggttcagaaggtgatagacacaaacacaaggactctaagccagaagtat
catagtgatggaaatattatcaccatggtgattgataaatatatttatctggcaaagaag
gacagccatgttgttgaactttgggacaaaaaattatacaaaatgagtatgtcaattgat
tgtgcttctattcttaagaatgagacatactcagccagagtgaaagcactttatcttcag
aagacaagcaccctttggattggaacaggaggaggtgatgtcgtattattagatctttcc
actcatcaacccatttgggtcattgagaaattttgtcattctatcagaagtatggtgcca
gcacaaattgagaagggacaccttcgtactgtcatgctgatcctaggaaatgtctgtata
gattacaatgaaaacgacaaacagcagagcgaattgcaatcacagctatttgtttgggac
ttgaatcttccatatgagatccagagcctgaagaagcacacagatatgagaagagaaata
actgaaaaaatgagattgggttctttggaatga
DBGET
integrated database retrieval system
