Rhincodon typus (whale shark): 109938879
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Entry
109938879 CDS
T06055
Symbol
jarid2b
Name
(RefSeq) protein Jumonji
KO
K11478
protein Jumonji
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
109938879 (jarid2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtp03036
]
109938879 (jarid2b)
Chromosome and associated proteins [BR:
rtp03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
109938879 (jarid2b)
Polycomb repressive complex (PRC) and associated proteins
PRC2.2
109938879 (jarid2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
ARID
JmjN
zf-C5HC2
Motif
Other DBs
NCBI-GeneID:
109938879
NCBI-ProteinID:
XP_048463592
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Position
2:complement(115043987..115165452)
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AA seq
1101 aa
AA seq
DB search
MVDPVLPPPATQIIDLSKRKPKTEDFLTFLCLRGSPALPNNMMYFGSSQDDIDEVEEDDE
YEDVKTLPNNASSSCHSTPRKGKPQGKQVLNGHVLNGSSKLLREKESIQKHKGKEATPGK
EKNSDQKVECKKEPCSTGTAANSSLMRSSTKDSAANGSAVTKPSQELRTPQVSKGVNGDA
QTLSLGATASSAKKNREVRPSPAKPVKYTATVTKGNVTYTKAKKEPVKETKLNHVNSSVA
VNHTISGKTESSNAKSRKQVLSNGTSHSNGAALSCVKLNGKMNGKTSAKVEVREFKEGLR
TSKRRHEEVNHIVKPQSPSKRVKANTCTAGAKDNKANTKEKTLPNGRIKYETPVKNSERQ
RLRKASLGKNTPNKQAQSKLESASSENSSTSATESSHKPQDSSVKQEKGTKVGMALVGEI
PILRPTQKEFHDPLVYVESVRPQTEKYGMCRVIPPTDWRPECKLNDEMRFVTQIQHVHKL
GRRWGPNVQRLACIKKHLRSQGITIDEPPLIGGCELDLARFYQLINDMGGMQQVTDLKKW
NKLADMLRIPKTAQDRLAKLQEAYCQFLLSYDSLSQEEHKKLEKEVLMEKENLEKRKGPL
EAHSDSTYKSQSLPRFEPKNGLVNGVVHKNGFRNKLKEIDTELKTGRRRLFAQEKKESED
DEVLSDLYKCIYKGRSVSLTTFYRTARNMMNMCFSKEPTAAEVEQEYWRAVEQKDSHVAV
HSGKVDTKAHGSGFPVGKSEPFSRHGWNLTVLPNNSGSILRHFGALSGVTIPWLNIGMVF
TTSCWSRDQNHLPYIDYLHTGADCIWYCIPAEEKSKLDEVVHTLLQANGTSGLDMLESNI
MISPEVLCKEGIKVCRTVQQSGQFIICSPGAFVSKVCCGYSVSEAVHFATTEWLNMGYEA
AKDLKRRYIANAFSMEKLLYLIATAESKRESGSTLSHISSLLKELRDTESRQRQQLLDAG
LHSSARYGSHDSHLSMMDMKKKPRKWLASETSERRCQICQQLCYLSMVVQENENVVFCLE
CALRHVEKQKSCRGLKMMYRYDEDQINNLANQICGKAAANSSDNNTSTSKPALKRGPRKR
ATIDVPATRLSSLSRSATSSP
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atggtggatccagtcttgccaccacctgcaacgcagattattgatctttcaaaacgaaag
cccaaaacagaggatttcttaacttttctttgccttagaggctctcctgccctgccgaac
aacatgatgtattttggaagttcgcaggatgacattgatgaagtagaagaagatgatgaa
tatgaagatgtcaaaacacttccaaacaatgcttcatcttcatgccattcaacacctagg
aaaggaaaaccacagggtaaacaagtcctcaatggtcatgttttgaatggttccagcaag
cttttgagagagaaagaatctatccagaaacacaaaggaaaagaggccacgccagggaag
gagaagaacagtgaccaaaaggttgagtgcaagaaagagccgtgttcaacagggactgct
gctaattcttcattaatgcgcagctcaacaaaagactctgctgctaatggctcagctgtt
acgaaaccatctcaggagctccgaacaccacaggtttcaaagggggtgaatggtgatgcc
caaactctatcgttaggcgcaactgcatctagtgccaaaaagaatagggaggtcagacca
tcaccagccaaacctgtgaagtacactgcaacggtgacaaaaggaaatgttacatacacc
aaagccaagaaagaaccggttaaggaaaccaaactgaaccatgtcaattccagtgtagct
gttaaccatacaatctcagggaaaactgaaagcagcaatgcaaaatcaagaaaacaggtg
ctatccaatggaacgtcccattcaaatggtgctgcccttagctgtgttaaattaaatgga
aagatgaatgggaaaacatcagcgaaagttgaagtcagagaatttaaagaaggactgcgg
acctccaagaggaggcatgaggaggtcaaccatatagtgaaaccacagtcaccttcaaaa
agagtgaaagctaacacatgtacagcaggagctaaagacaataaagcaaatacaaaagaa
aaaactttacctaatggacgaataaagtatgaaacaccagtgaaaaacagtgaaagacag
aggcttaggaaggcatccttaggtaagaacaccccaaacaaacaagcacagagcaaattg
gaaagtgcctccagtgaaaatagttctacctcagctacagagtcctcgcacaagccacaa
gactcttcagtaaaacaggagaaaggcaccaaggttggcatggcactggttggagaaatt
cccattctcaggcctacccagaaggagtttcatgacccattagtttatgtggaatctgtc
cgacctcagacggagaagtatggcatgtgccgggtgatccctcccactgactggagaccc
gagtgcaaattgaatgatgaaatgcggtttgtgactcagattcagcacgtgcataaactg
ggtagacgctggggacccaatgtacaacgactagcttgtatcaagaaacatcttagatct
cagggcattactatagatgagcccccactcataggaggatgtgagctggacttggcccga
ttttatcagctgatcaatgacatgggcggcatgcagcaagtgactgacctcaagaagtgg
aataaattagcagacatgctgcgaattcctaaaactgcacaggacaggctggccaagttg
caagaggcctactgccagttcctactttcctatgactccctttcccaggaagagcacaag
aagctggagaaagaggtattaatggaaaaagagaacctggagaagaggaaagggcccttg
gaagcacattcagacagcacatacaagtctcagtcactgcccaggtttgagccaaaaaat
gggctggtaaatggtgtggtgcataaaaatggcttccggaataagcttaaagaaatagac
actgaattgaaaacaggcaggcggcgattgtttgctcaggaaaagaaggagagtgaagat
gacgaagttctcagtgatttgtacaagtgtatatataagggacgatctgtgtcactgact
acattttatcggacagctagaaacatgatgaatatgtgctttagtaaggaaccaacagca
gctgaagtggagcaagaatactggagggctgtggagcagaaagactcccacgtagcagtg
cattctggaaaagtagacacaaaagcacatggcagtgggttccctgttgggaaatcagaa
cctttttcaaggcatggatggaaccttacagtccttcctaataattcagggtccatcctg
cgacattttggtgctttgtcaggagtgacgattccttggctaaacattggcatggttttc
actacctcatgctggtcacgagaccaaaaccaccttccgtacattgactacttacacact
ggtgctgattgcatttggtattgtattcctgctgaggagaagagcaaacttgatgaagtg
gtgcataccctgctgcaagctaatggcacatcagggctggatatgcttgaaagtaatata
atgatctctccagaggtcctgtgtaaggaggggatcaaagtgtgtcgtactgtacagcag
agtggccaatttattatatgctccccaggagccttcgtctccaaagtgtgttgtggctac
agtgtttcagaagctgtacattttgcaactaccgaatggttaaatatgggctatgaagct
gctaaggatttgaaacggcggtacattgctaatgcattttcaatggaaaaattactttac
cttattgcaacagcagagtcgaaacgagaaagtgggtcaacactaagccacatttcttca
cttttgaaagaactcagggatacagagtcgagacagcggcagcagctgcttgatgcgggt
ttgcattcatcagctcgctatggtagccatgacagccacctctccatgatggatatgaag
aaaaaaccacggaaatggttagcctcagaaacatcagagaggagatgccaaatctgccag
cagttgtgttacctatccatggtagtacaagaaaatgagaatgttgtcttctgtcttgag
tgtgctcttcgccatgtagaaaagcagaaatcttgtcggggattgaagatgatgtatcgc
tatgatgaggatcaaataaacaatttagccaatcaaatctgtggaaaagcagcagctaac
agcagcgacaacaatacaagtaccagcaagcctgcactgaaaagagggcctcgaaaacga
gcgaccattgatgtgccagcaactagactttcgtccttgtccagaagtgctacaagttcc
ccatga
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