Rhincodon typus (whale shark): 109938997
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Entry
109938997 CDS
T06055
Symbol
pja2
Name
(RefSeq) E3 ubiquitin-protein ligase Praja-2 isoform X3
KO
K10634
E3 ubiquitin-protein ligase Praja2 [EC:
2.3.2.27
]
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtp04121
]
109938997 (pja2)
Enzymes [BR:
rtp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109938997 (pja2)
Ubiquitin system [BR:
rtp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109938997 (pja2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_11
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
109938997
NCBI-ProteinID:
XP_048448122
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All DBs
Position
3:74517883..74568762
Genome browser
AA seq
636 aa
AA seq
DB search
MGQESGKTAWPRPAGGYQTITGRRYGRRHAYVSFRPSIAKSWNHLKENERQWEEMELNTV
SKDNGLSPSRILSTNELLPQSTAYDLTMDTKRDAGCEPQKENGFLPSSLNQRLFQCESND
FALPSATEPLDNYSGSQSTGPSKWSIPNDFFETDSRSPTGIGFVNIDSYEPESSEGEDED
STIQASLQKEGKLQKRLDTMLSELEKGVDYLNGLQSYLSAVIHDGNSPQIDLPCSLALDD
LTSADIGVKGHQTELKEHRKILPAVGNMEEINSYVRMEDVKEKRERNLDKASLSIQTEGN
IFCCMTEEPSSSEMVVRPKVRKERVETCSKRDLSSPDEFGSYCTGDMKANSRNECCGSNS
ALWNCRNKLHRDSKIGSGLNGKETVGVEKEQATIQLQETLEENSFWDDFENYCNKGETRE
QTSLEEGEIPWVAFNEESDSSSNSTDETEGLGQLAHSGLLILDDNNNFEDDSSVSEDLDM
EWRLLDELGEGLTAQAISSVDPQLLTFMALEERLAQAMEAALAHLESLAIDGEQAPPPAP
KETIECLPQVAVSEGHNGLEQSCAICCSEYVKEELVTELPCHHLFHRPCVTLWLQKSGTC
PVCRHILSSTLPETATTAFLSEPEIPPSTRDGPAIR
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaagaatctgggaagacagcctggcccagaccagcaggaggttatcagactatc
accggacgaagatacgggagaaggcatgcttatgttagctttcgtccttctattgccaag
tcatggaatcacttaaaagaaaatgagcgccaatgggaagaaatggagctaaacactgtt
tcaaaagataacggtttatctcccagtagaatcttatcaacaaatgaacttctgccgcaa
tccacagcgtatgacctaactatggatactaaaagggatgcaggttgtgaacctcagaaa
gagaatggatttttgccatcatctctgaaccaaagactttttcaatgtgagtccaatgac
tttgctttgcccagtgctacagagccattagacaattattcaggtagccaaagtacaggg
ccctccaagtggtcaattcctaatgatttttttgagactgattccagaagtccaactggc
attggttttgtaaatattgactcttatgaaccagaaagcagtgaaggagaggatgaagat
tcaaccattcaagcatctttgcaaaaagaaggaaaacttcagaaaaggttggacaccatg
ctttcagagttagagaaaggtgttgactatcttaatgggttacagtcgtatctctcagct
gtaatccacgatggtaacagcccacagattgatctaccatgctctctggcattggacgat
ttgacttctgcagacattggtgttaaaggacatcaaactgaattgaaagagcataggaaa
atattaccagcagttggaaatatggaagaaattaatagctatgtcaggatggaggatgta
aaagaaaaaagagaaagaaatcttgataaagcctcactgagcattcaaacggaaggaaac
attttctgttgtatgacagaggaaccgagctcttcagaaatggtagtaagaccaaaagtt
agaaaggaaagagttgaaacctgttctaaaagagatctatcttcccctgatgagtttggt
agttattgtactggggatatgaaagccaattcaagaaatgagtgctgtggatcaaactct
gccttgtggaactgcagaaataaactccatagagattcaaagatcggatctggacttaat
ggcaaggaaacagttggtgttgagaaggaacaggccaccatccaactacaagaaacgctg
gaagaaaacagcttctgggatgactttgaaaattattgtaacaaaggtgaaacgagggaa
caaacctccttggaagaaggggagatcccctgggtagcatttaatgaagaaagtgacagc
agcagcaatagtactgatgagactgaaggcttgggtcaacttgcacattcaggacttcta
attctggatgataacaacaactttgaagatgattcaagtgtaagtgaagacttggacatg
gaatggagattgcttgacgaacttggtgaaggacttacagctcaagctatttcatctgtt
gatccacaattacttacctttatggctctggaagagcggttggctcaagcaatggaggct
gctttagcacatcttgagtctctggccattgatggtgagcaagctccccctccagctccc
aaggaaacaattgaatgtttaccacaagttgcagtttctgaggggcataatggcctggag
caatcctgtgccatctgttgcagtgaatatgtaaaggaagagttggtgacggagttacca
tgtcatcatctatttcataggccatgtgtaaccctctggctacagaagtctgggacatgt
ccagtatgtcgtcacattctttcatcaacacttcctgaaactgctactactgcattttta
tcagaaccagagatccctccttctacccgtgatggtcctgcaatacgatga
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