KEGG   Rhincodon typus (whale shark): 109939048
Entry
109939048         CDS       T06055                                 
Symbol
stx18
Name
(RefSeq) syntaxin-18 isoform X1
  KO
K08492  syntaxin 18
Organism
rtp  Rhincodon typus (whale shark)
Pathway
rtp04130  SNARE interactions in vesicular transport
rtp04145  Phagosome
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    109939048 (stx18)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    109939048 (stx18)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rtp04131]
    109939048 (stx18)
Membrane trafficking [BR:rtp04131]
 SNARE
  Syntaxin (Qa)
   Stx-rER
    109939048 (stx18)
SSDB
Motif
Pfam: Syntaxin-18_N CarD_C TMEM120A-B DUF2120
Other DBs
NCBI-GeneID: 109939048
NCBI-ProteinID: XP_048451716
LinkDB
Position
1:162036096..162189095
AA seq 329 aa
MAADITLLFRASVKTVKTRNKAIGVSGEPVKEEILRKGRTRAEFTARAREVLTNISKLKD
FLLEHRKDYINASSFVMSEYSSMTDMERDQIDQDAQIFMRACSDAIHQLRAEAMKNVISP
QVKEHREGVLDLLEVYLKNVCKVYSEQRAIRVKRVVDKKRLSRLEPEQHSNKTLISSPEN
IPPVRPENSEELVLKDESNDKSYPEVHENLGVWEDSKEDELSPEEIQMFEQENQRLVSEM
NSLVDEVRQIEGKVVEISRLQEIFTDKVLQQEKEIDSIHELVVGTTENVKEGNEDIREAI
KNNAGFRVWILFFLVMCSFSLLFLDWYDS
NT seq 990 nt   +upstreamnt  +downstreamnt
atggcggccgacatcacgctgttgttccgagcgagtgtgaaaaccgtcaaaactcggaac
aaggcgatcggtgtcagtggcgaaccggtcaaagaggagatcctgaggaaggggaggact
agggccgagttcaccgcccgggccagagaagtgctcacgaacatcagcaagttgaaagat
tttcttctggagcacagaaaagattacatcaatgctagcagctttgtaatgtcagaatat
tccagtatgacagatatggaacgtgaccagattgatcaggatgcccagattttcatgcgc
gcatgctctgatgccattcatcagctgagggcagaagccatgaagaatgtgatttctccc
caagtgaaggaacaccgggaaggtgtattggatttgcttgaagtttacctgaaaaatgtg
tgtaaagtgtactctgaacaaagggctattcgagtcaagcgagtggtggataagaaaaga
ttgtcaagacttgaacctgaacagcatagcaacaagacattaatatcatctccagagaat
attcctcctgtcaggccggaaaattcagaggagctggtcttaaaagatgaaagcaatgat
aaaagttatccagaagtacatgaaaatttgggtgtctgggaggattcaaaggaagatgaa
ctttcaccagaagaaattcaaatgtttgaacaggaaaaccagcgccttgtcagtgagatg
aacagcctggtggatgaagtgaggcaaattgaaggaaaggtggttgaaatctccaggctt
caagaaatttttactgacaaagtgcttcaacaggagaaagagattgacagcattcatgag
cttgttgtgggtacaaccgagaatgttaaagaggggaatgaagacatcagagaggcaatc
aaaaataatgctggatttcgcgtgtggatcctcttcttcttggtgatgtgttccttctct
ctgcttttcttggactggtatgacagttga

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