Rhincodon typus (whale shark): 109939048
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Entry
109939048 CDS
T06055
Symbol
stx18
Name
(RefSeq) syntaxin-18 isoform X1
KO
K08492
syntaxin 18
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04130
SNARE interactions in vesicular transport
rtp04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
109939048 (stx18)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
109939048 (stx18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109939048 (stx18)
Membrane trafficking [BR:
rtp04131
]
SNARE
Syntaxin (Qa)
Stx-rER
109939048 (stx18)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin-18_N
CarD_C
TMEM120A-B
DUF2120
Motif
Other DBs
NCBI-GeneID:
109939048
NCBI-ProteinID:
XP_048451716
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Position
1:162036096..162189095
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AA seq
329 aa
AA seq
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MAADITLLFRASVKTVKTRNKAIGVSGEPVKEEILRKGRTRAEFTARAREVLTNISKLKD
FLLEHRKDYINASSFVMSEYSSMTDMERDQIDQDAQIFMRACSDAIHQLRAEAMKNVISP
QVKEHREGVLDLLEVYLKNVCKVYSEQRAIRVKRVVDKKRLSRLEPEQHSNKTLISSPEN
IPPVRPENSEELVLKDESNDKSYPEVHENLGVWEDSKEDELSPEEIQMFEQENQRLVSEM
NSLVDEVRQIEGKVVEISRLQEIFTDKVLQQEKEIDSIHELVVGTTENVKEGNEDIREAI
KNNAGFRVWILFFLVMCSFSLLFLDWYDS
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgacatcacgctgttgttccgagcgagtgtgaaaaccgtcaaaactcggaac
aaggcgatcggtgtcagtggcgaaccggtcaaagaggagatcctgaggaaggggaggact
agggccgagttcaccgcccgggccagagaagtgctcacgaacatcagcaagttgaaagat
tttcttctggagcacagaaaagattacatcaatgctagcagctttgtaatgtcagaatat
tccagtatgacagatatggaacgtgaccagattgatcaggatgcccagattttcatgcgc
gcatgctctgatgccattcatcagctgagggcagaagccatgaagaatgtgatttctccc
caagtgaaggaacaccgggaaggtgtattggatttgcttgaagtttacctgaaaaatgtg
tgtaaagtgtactctgaacaaagggctattcgagtcaagcgagtggtggataagaaaaga
ttgtcaagacttgaacctgaacagcatagcaacaagacattaatatcatctccagagaat
attcctcctgtcaggccggaaaattcagaggagctggtcttaaaagatgaaagcaatgat
aaaagttatccagaagtacatgaaaatttgggtgtctgggaggattcaaaggaagatgaa
ctttcaccagaagaaattcaaatgtttgaacaggaaaaccagcgccttgtcagtgagatg
aacagcctggtggatgaagtgaggcaaattgaaggaaaggtggttgaaatctccaggctt
caagaaatttttactgacaaagtgcttcaacaggagaaagagattgacagcattcatgag
cttgttgtgggtacaaccgagaatgttaaagaggggaatgaagacatcagagaggcaatc
aaaaataatgctggatttcgcgtgtggatcctcttcttcttggtgatgtgttccttctct
ctgcttttcttggactggtatgacagttga
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