Rhincodon typus (whale shark): 109939107
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Entry
109939107 CDS
T06055
Name
(RefSeq) receptor-type tyrosine-protein phosphatase delta isoform X1
KO
K06777
receptor-type tyrosine-protein phosphatase delta [EC:
3.1.3.48
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
109939107
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rtp01009
]
109939107
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rtp04515
]
109939107
Enzymes [BR:
rtp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
109939107
Protein phosphatases and associated proteins [BR:
rtp01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
109939107
Cell adhesion molecules [BR:
rtp04515
]
Immunoglobulin superfamily
Type II RPTP family
109939107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
Interfer-bind
V-set
PTP-SAK
Tc-R-P
DSPc
NDNF
Y_phosphatase3
PTPlike_phytase
Ig_VEGFR-1-like_5th
PTP-NADK
DUF4998
Ig_5
DUF5849
Glyco_hydro_46
Motif
Other DBs
NCBI-GeneID:
109939107
NCBI-ProteinID:
XP_048451023
LinkDB
All DBs
Position
3:complement(40212464..40755325)
Genome browser
AA seq
1913 aa
AA seq
DB search
MMHKIRPLVVFLCFLLLANAEAPPKFTRTPIDQTGVSGGVASFICQASGEPRPKIVWSKK
GKKVSSQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVASNSVGEISATTRLTVLREDQ
LPVGYPTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTSTNGRIKQLRSG
ALQIENSEESDQGKYECVATNSAGTRYSAPANLYVRVRRVPPRFSIPPTSHEIMPGGSVN
ITCVAVGSPMPYVKWMLGAEDLTPEDDMPIGRNVLELNNVRESANYTCVAMSTLGVIEAF
SEVTVKALPKPPGTPVVTETTATSVTLTWDSGNPEPVAHYIVQHKPKHSDGPFQEIDGVA
TTRYSVGGLSPYSDYEFRVIAVNNIGQGPPSEPVETRTGEQAPSSPPRSVQARMLSTTTM
LIQWEEPEEANGQIRGYRVYYTMDPQQHINNWQKHNVDDSMLTTIANLTPETTYTIRVLA
FTSVGDGPHSPEIQVKTQQGVPSQPNNFKAEPKSDTSIMLSWIPPRQDTIIRYELYYREG
EYGKEQLVTFEPKTTYLLEDLKPNTMYFFRLAARSEHGLGASTAQISAQTMETKPSAPPQ
DIKCMSPSSTSILVSWLPPPADNQNGIITKYTIKYTANDQEASSPNEVSDIPPDTRQYLL
EHLEKWTEYRIIMTAHTDVGPGPESSPILIRTDEDVPSGPPRKVEVEALNSTAIIVSWRS
PVPNKQHGQIRGYQVHFVRMEHGEPRGQPMLKDIMLADAQWESDDSAEHEMIISGLLPET
TYSVTVTAYTTKGDGARSRAKLVATTGAVPGKPRLLVSHTQMNTALIQWHPPVETFGPVL
GYRLKFGRKDSELLTTLEFSEKDDHYTATDIHKGTSYVFKLSSKNKVGFGEEIVKEITIP
EERPSGFPQNPRAESSTASTIHLSWQPPVLAERNGLITKYNVLYRDINSPNNRIELSVAS
PETSLKLTNLKPDTTYDIKVRAYTSKGPGPYSPSVQFRTLPLDPAVFAKNFHVKAVMKTS
VLLTWEIPENYNTAIPFKIIYNNDHIEVDGRATQKLITNLDPDTSYSFVLTNRGNSAGGL
QQVVSAHTAPDLLRTKPVLIEKTNSDGMLTVELSAVPTPPAPVKGYYIIVVPLKKSRGKF
IKPWDSPDEMDLEELLREISRKRRSIRLRRQADALKPYIAAHFEILPNEFTLGDQLFYNG
FENKRLQSGQEYVFFILAVLDSPESMMYATSPYSDPVLSADLEPQPIKDEEEGLIWVVGP
VLAVVFIICIVIAILLYKRKRTESDSRKSSIPNSKELPSHHPTDPVELRRLNFQTPGSGV
SSYHGNLHSTSMANHPPIPISELADHIERLKANDNLKFSQEYESIDPGQQFTWEHSNMEV
NKPKNRYANVIAYDHSRVLLSAIDGIPGSDYSNSNYIDGYRKQNAYIATQGPLPETFGDF
WRMIWEQRSAIVVMMTKLEERSRVKCDQYWPSRGTETFGLIQVTLQDTVELATYCVRTLT
LDKIGSSEKREVRQFQFTAWPDHGVPEHPTPFLAFLRRVKACNPPDAGPMVVHCSAGVGR
TGCFIVIDAMLERIKHEKTVDIYGHVTLMRSQRNYMVQTEDQYIFIHDALLEAVTCGNTE
VPARNLYAYIQKLTQVEPGENVTGMELEFKRLANTKAHTSRFISANLPCNKFKNRLVNIM
PYESTRVCLQPIRGVEGSDYINASFIDGYRQQKAYIATQGPLAETTEDFWRMLWEHNSTI
VVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRT
VRQFQFTDWPEQGVPKSGEGFIDFIGQVHKTKEQFGQDGPISVHCSAGVGRTGVFITLSI
VLERMRYEGVVDIFQTVKMLRTQRPAMVQTEDQYQFCYRAALEYLGSFDHYAT
NT seq
5742 nt
NT seq
+upstream
nt +downstream
nt
atgatgcataaaatcaggccactggtggtgttcctgtgcttcctactacttgctaatgct
gaagcaccaccaaagtttacaagaactcccattgaccagacgggagtctccggaggggtt
gcgtcatttatctgccaagcctcaggagaaccgaggcccaaaattgtatggtctaaaaaa
ggaaagaaagtcagctctcagcgatttgaggtgatcgagttcgatgatggatctggatct
gttctcagaatacagccattacgaacgccacgagatgaggctatttatgaatgtgtagcc
tccaacagtgttggagaaataagtgccaccaccaggcttacagtgttacgtgaggatcag
cttcctgtgggttatcccacgatagacatgggccctcagttgaaggtggtagaacgaaca
cgcacagccaccatgttgtgcgcagctagcggtaaccccgatcccgaaattacttggttc
aaagacttcttacctgttgatacaagcactaatggacgcatcaaacagctacggtcaggt
gccctccaaatagagaacagtgaggaatcagaccaaggaaaatatgagtgtgtggcaacc
aacagtgctggtacacgttattctgctcctgccaatctatatgtgagagttcgtcgtgtc
ccaccgaggttttctattcctccaacaagccacgagatcatgcctggtggaagtgtaaat
atcacttgtgtcgctgtgggatccccaatgccttacgtgaaatggatgcttggagcagaa
gatctgactcctgaagatgacatgccaattggacgaaatgtcctggagctcaacaacgtc
agagagtctgcaaattatacctgtgttgccatgtcaacgcttggagtcatagaagcattt
tccgaggtcacagttaaagctttgccaaaacccccaggcacccctgttgtaactgaaact
acagcaacaagtgtcacattgacttgggattcaggaaatccagagcctgtggctcactat
attgtacaacacaagcccaagcattcagatggaccatttcaagagattgatggggtggct
acaacacgatacagtgttggaggactaagcccttactcggattatgagttcagagtcatt
gcagtgaacaatattgggcaagggccaccaagtgaaccggtagaaacacgaacaggtgag
caggccccttccagcccacctcgctctgtgcaagcccgcatgttgagcactactaccatg
ttaattcaatgggaggagccagaggaggcaaatggtcaaatccgtggatacagagtttat
tacactatggatccacaacagcatattaacaactggcagaagcacaatgtagatgacagt
atgctgacaacaattgcaaacctgactccagagactacttataccatccgtgtgctggct
ttcacttctgttggggatggaccacattcacctgaaatacaggttaaaactcaacaagga
gttccaagccagccaaataacttcaaagcagaaccgaaatcagacaccagtattatgctg
tcatggataccaccacgacaggacactatcatcagatatgaattgtattacagggaagga
gaatatggaaaagagcaacttgtcacatttgaaccaaagacaacatatcttttagaggat
ttgaaaccaaacactatgtacttcttccgacttgctgctcgctctgagcatggccttgga
gcttcaactgcgcagatttcagcccaaaccatggagactaaaccatcagccccacctcag
gatatcaagtgcatgagcccaagctcgaccagcattttggtaagttggctgcccccacca
gcagacaaccagaacggcatcatcaccaaatacaccatcaaatatactgccaatgaccaa
gaagccagctcgcccaacgaagtctcggatattccgccagataccaggcagtacttactg
gaacatttggaaaaatggactgagtaccgcatcattatgactgcccacacggatgttgga
ccaggcccagagagctctcccatactgattcgcacagatgaggatgttcctagtggtcct
cctcgcaaagtcgaggtagaggctttgaactcaacagctattatagtgtcatggcgctcg
cctgttccaaataaacagcacggacaaatacgtggctaccaggtccatttcgtgaggatg
gaacatggagaaccgagaggacagcccatgctcaaagatatcatgctggcagatgcgcag
tgggaaagtgatgactctgctgaacatgagatgatcatttctggacttctgcctgaaacg
acatactctgtcactgtgacagcttatacgacaaaaggagatggagctcgaagcagagcc
aagcttgtggcaaccactggtgcagttcctgggaaaccaagactccttgttagtcataca
cagatgaatactgctcttattcagtggcatcctcctgtagaaacctttggaccagttcta
ggttatcgtttaaaatttgggcgcaaagactctgaattgttgacaacattggaattttca
gaaaaggatgaccattatacagctactgacatccataaaggcacctcttacgtcttcaaa
ctctcctcaaaaaataaagttggctttggggaagagattgtgaaagaaatcacgattcca
gaagaaagaccgagtggatttccccaaaacccacgtgctgaaagctccacagcttcgacg
attcatttgagttggcagccaccagtcttggcagaaaggaatgggttaattaccaagtat
aacgttttatacagagatatcaacagtccaaataatcggattgagctctctgttgcttcg
cccgagacaagtttgaagctcaccaacctaaaaccggacaccacttatgatatcaaagtg
agagcttatacaagtaaaggtcctggtccttatagccctagtgttcaattccggacactg
ccactggatccagcagtgtttgcaaaaaattttcatgttaaagctgtaatgaagacatca
gttttattaacgtgggagattccagagaactacaacactgccattccttttaaaatcatc
tacaataatgaccatattgaagtggatggaagagctacacaaaagctaatcaccaattta
gaccctgacacatcgtattcatttgttttgaccaatcgaggaaacagtgctgggggccta
cagcaagtggtctcagcacacaccgctccagacctgctccgcaccaagccagtcctgatt
gagaaaaccaattctgatggaatgctgactgttgagctgtcagcagtgccaacaccacca
gccccagtaaaagggtactatataattgttgtgcctttgaagaaatcccgtgggaaattt
atcaagccttgggacagtcctgatgaaatggatttggaggagttactgagagaaattagc
agaaaacgaagaagtatccgtctaaggaggcaagcagatgctcttaagccatacattgcc
gcccactttgagatcctgcccaatgaatttacccttggtgatcagctgttttacaatgga
tttgaaaataagcgtctccaaagtggccaagaatacgttttctttattttagcggtactt
gacagccctgaatctatgatgtatgcaacaagtccatactctgatcctgtactgtcagcg
gaccttgaacctcagcccattaaagatgaagaagaaggattgatatgggtagttggccct
gtattagctgttgtgttcatcatctgcattgtcattgctatcctcctgtataaaaggaaa
aggacagaatctgactcgcgaaaaagcagcattccgaacagcaaagaattaccttcccat
catcccacggacccagtagaactaagacgtctcaattttcagactccaggttcaggtgtc
tccagttaccatggtaacctccattcaacaagcatggccaatcatccaccaatccctatc
tctgagctcgcggatcacattgagcggttgaaagctaatgacaacttgaagttctcgcag
gagtatgagtcaattgatcctggccaacagttcacatgggaacattcaaacatggaagtc
aacaaaccaaagaatagatatgcaaacgtaattgcatatgaccattcacgggttctccta
tctgcgattgatggcataccaggaagtgattactccaattccaattatattgacggctat
agaaaacagaatgcctacattgcaacacagggtcctctgcctgagacatttggagatttt
tggaggatgatatgggagcagcgaagtgcaattgttgtgatgatgactaaactagaagaa
agatcgagggtaaaatgtgaccagtattggccttcacgaggaaccgaaacgtttggatta
atccaagttactctacaggatactgttgaactggcaacttactgtgttagaacgttaaca
ttagacaagattggctccagtgaaaagagggaagtacgacaattccagttcacagcgtgg
cctgatcatggggttccagaacacccaacaccattccttgccttcctgcggcgagtaaaa
gcctgcaaccctccagatgctgggccaatggttgtacattgtagtgctggagttggaagg
actggttgtttcattgtaatagatgccatgttggagagaataaagcatgagaaaactgta
gatatttatggtcatgtaacactaatgagatcacagaggaattacatggttcagactgag
gaccaatatatctttattcatgatgcactgcttgaagcagtgacttgtggaaataccgaa
gtgccagccaggaacctatacgcgtatatccagaagctgacacaagtggagccaggagaa
aacgtcacaggaatggaactggaattcaagcgtcttgccaacacgaaagcccacacatca
agattcattagtgccaaccttccatgtaataaattcaagaatcgccttgttaatattatg
ccatacgaatctacgagagtatgtctacaaccaatcagaggagttgagggctcagactat
attaatgccagttttattgatggttataggcagcagaaagcatatatagccacacaggga
cccttagcagagacaacagaagatttctggagaatgctttgggagcacaactctacaatt
gtggttatgttgaccaaactacgagaaatgggcagagagaaatgtcaccaatattggcct
gcggagcgatcagctaggtatcagtatttcgtagtagaccccatggcagagtacaacatg
ccacaatacattctcagagagttcaaagttacagatgctagggatggtcagtcacgcaca
gtaaggcagttccagtttactgactggccagagcaaggagtgccaaagtctggcgaaggt
tttattgatttcataggccaagtgcacaagacaaaagagcaatttgggcaggatggaccc
atcagcgttcactgcagtgctggtgttgggaggactggtgttttcataacactaagtatt
gtgttggaaagaatgaggtacgagggagttgtggatatctttcagactgtcaagatgcta
agaacacaacgaccagctatggtgcagacagaggatcagtatcaattctgttatcgagct
gcactggagtaccttggaagcttcgatcactatgcaacataa
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integrated database retrieval system
