Rhincodon typus (whale shark): 109939114
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Entry
109939114 CDS
T06055
Symbol
cldn5a
Name
(RefSeq) claudin 5a
KO
K06087
claudin
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03272
Virion - Hepatitis viruses
rtp04382
Cornified envelope formation
rtp04514
Cell adhesion molecule (CAM) interaction
rtp04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
109939114 (cldn5a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
109939114 (cldn5a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
109939114 (cldn5a)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
109939114 (cldn5a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rtp03037
]
109939114 (cldn5a)
04147 Exosome [BR:
rtp04147
]
109939114 (cldn5a)
Cilium and associated proteins [BR:
rtp03037
]
Other cilia and associated proteins
Stereociliary proteins
109939114 (cldn5a)
Exosome [BR:
rtp04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
109939114 (cldn5a)
Exosomal proteins of colorectal cancer cells
109939114 (cldn5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
zf-LITAF-like
DUF7541
Motif
Other DBs
NCBI-GeneID:
109939114
NCBI-ProteinID:
XP_020392998
LinkDB
All DBs
Position
24:complement(7107480..7111605)
Genome browser
AA seq
216 aa
AA seq
DB search
MPSAGLEIVGLGLCVLGWLGVMLACGLPMWKVTAFIESNIVVAQTVWEGLWMNCVVQSTG
QMQCKVYNSLLALEQDQQAARALTVIASILGLIGLLVTILGAQCTNCTEGITTKARIVIS
GGAIFIVAGLLALIPVCWMANTIVRDFYDPVVPVSKKREMGAALYVGWTASALLFIGGSL
LCCSCPPKQDQSSFAVKYTAPRRASANGDYDKRNYV
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgccatcggccggcttggagattgtgggcctgggactgtgcgtcctgggctggctcggg
gtgatgctggcgtgcgggctgcccatgtggaaagtcacggctttcatcgagagcaatatc
gtggtggctcagaccgtctgggaagggctgtggatgaactgcgtggtgcagagcaccggc
cagatgcagtgcaaggtctacaactcgctgctcgccctggagcaggatcaacaggccgcc
cgggcgctgacagtcatcgcctccatcctgggcctcatcggtttactggtcactatcctg
ggcgcccagtgcaccaactgcaccgaggggatcaccaccaaagcccggattgtcatcagc
gggggggctatcttcatcgtggccggccttctcgccctcattccagtctgctggatggcc
aacaccatcgtccgcgatttctatgacccggtcgtgccggtctccaagaaacgggagatg
ggggccgccctctatgttggctggacggccagcgctctcctcttcatcgggggctcgctg
ctctgttgctcctgccccccgaagcaagaccagtcatcgttcgccgtcaagtacacggcc
ccgaggagagcatcggcgaacggggactacgacaagaggaattatgtgtga
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integrated database retrieval system
