KEGG   Rhincodon typus (whale shark): 109939123
Entry
109939123         CDS       T06055                                 
Name
(RefSeq) ADP-ribosylation factor 4
  KO
K07939  ADP-ribosylation factor 4
Organism
rtp  Rhincodon typus (whale shark)
Pathway
rtp04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    109939123
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rtp04131]
    109939123
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rtp04147]
    109939123
   04031 GTP-binding proteins [BR:rtp04031]
    109939123
Membrane trafficking [BR:rtp04131]
 Endosome - Golgi transport
  Arf GTPases and associated proteins
   Arf GTPases
    109939123
Exosome [BR:rtp04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   109939123
  Exosomal proteins of other body fluids (saliva and urine)
   109939123
  Exosomal proteins of colorectal cancer cells
   109939123
GTP-binding proteins [BR:rtp04031]
 Small (monomeric) G-proteins
  Arf/Sar Family
   Arf [OT]
    109939123
SSDB
Motif
Pfam: Arf SRPRB Roc G-alpha Ras Gtr1_RagA MMR_HSR1 GTP_EFTU 6PF2K cobW
Other DBs
NCBI-GeneID: 109939123
NCBI-ProteinID: XP_020393006
LinkDB
Position
16:complement(29930334..29952929)
AA seq 180 aa
MGLTVSALFNKLFGKKQVRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
VSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIQEASEELNKMILEDELKDAV
ILVFANKQDLPNAFTISEITDKLGLQSFHNRIWHVQATCATQGTGLYEGLDWLSAELSKS
NT seq 543 nt   +upstreamnt  +downstreamnt
atggggctcactgtgagcgctttattcaataagctgttcggcaagaagcaagtcaggata
ttgatggtcggtttggatgccgctggtaaaacaacaatcttgtacaaactgaagctaggg
gaaattgttacaactattccaactattggattcaatgttgaaacagtggaatacaaaaac
gtatctttcactgtgtgggatgtcggtggccaagacaaaatcagacccttgtggaggcac
tatttccagaatacccagggtcttatttttgtggtagatagcaatgatcgagagagaatt
caggaagcatcagaagaactgaacaaaatgattctagaagatgaattgaaagatgcagtt
atactggtatttgccaacaaacaggacctcccaaatgccttcaccatcagcgaaataaca
gataaattaggtctacagagcttccataacagaatttggcatgttcaggctacatgtgct
acacaagggactggcttgtatgaaggccttgactggttgtcagctgaactgtcgaaatcc
tag

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