Rhincodon typus (whale shark): 109939145
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Entry
109939145 CDS
T06055
Symbol
stxbp5a
Name
(RefSeq) syntaxin-binding protein 5a isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109939145 (stxbp5a)
Membrane trafficking [BR:
rtp04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
109939145 (stxbp5a)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
109939145 (stxbp5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
Beta-prop_EML_2
WDR55
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_1st
Lgl_C
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_WDR3_2nd
WD40
Beta-prop_IFT140_1st
WD40_Prp19
EIF3I
Beta-prop_NUP159_NUP214
Beta-prop_WDR5
Beta-prop_WDR19_1st
Beta-prop_VPS8
Synaptobrevin
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Motif
Other DBs
NCBI-GeneID:
109939145
NCBI-ProteinID:
XP_048456611
LinkDB
All DBs
Position
9:complement(16856443..17031380)
Genome browser
AA seq
1077 aa
AA seq
DB search
MPASSTLLFPYQHFCRGPAAVLARLNASWRNDTSSVQGALVSALADDTLHLWNLRQKRPA
ILHSLKFNKERITFCHLPFQSKWLYVGTERGNVHIVNVESFTLSGYVIMWNKAIELSSKT
HPGLIVHISDNPMDEGKLLIGFESGTLVLWDLKSKKGEYRYSYDEAIHSVAWHHEGKQFV
CSHSDGSLTTWNVKSPIRPAQIITPHGKLPKDGKKAEPCKPILKVEYRTCKSGDPFIIFS
GGLSYDTVGRRPCLTVMHGKTTAVLEMDYPIVDFLTLCETPYPSDFQEPYAVVVLLEKDL
VVVDLGQNGYPIFENPYPLDIHESPVTCCEYFADCPVDLIPALYSVGAKQKRQGYSKKEW
PINGGNWGLGTQSYPEIIITGHADGSLKFWDASAITLQVLYKMKTSKVFEKSRNKEEKPN
TDIVDEDPYAIQIITWCPESRMLCVAGVSAHVIVYKFSRQEVTTEAIQMLEIRLLYEIND
LESPETDQIPSLGAPCQGPNSQTANSQSHPSTSSSSSDGLRDNVPCLKIRSTPLKQGAGY
QAEVVIQLVWVNGEPPQQISSLAVNSSYGLLVFGNCNGIAMVDYIQKTVLLNLGTIELYG
SNDPYQRQPKSPRKTRQTSGGLCDINEGSTNLDDRCKSPTSGSTSSCNSEDEQKLPNFIE
RVKIKSRKLSKIVVSDIAKMSRKLSLPTELKPDLDVKDNSFSRSRSSSVTSIDKESREAI
TALHFCETYTRKADTCTSPCLWVGTTLGTVLVIVLNLPPGGEQRLTQPVIVSPSGTILRL
KGAILRIAFLDTTGSLINPAHEPWREPNVQEEKDDKDKCRKLRPVSVSPSSSQEINETQY
AVICSEKQAKVISLPSQNCIYKHNITETSFVLRADIVGLNGSICLACFCANGHIMTFSLP
SLRPLLDVNYLPLTDMRIARTFCFTNNGQALYLVSPTEIQRITYSQSTCENLQEMLGELF
TPVETPEAPNRGFFKGLFGGGAQSLDREELFGESAAGKPSRSLAQHIPGTGGIEGVKGAA
SGVAGELARARIALDERGQKLSELEERTAAMLYSADTFSKHAHEMMLKCKDKKWYQF
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcctcttcaacactgctatttccgtatcagcatttttgtcgcgggcctgctgca
gtgctggcgaggctcaatgcaagctggaggaacgacacctcatctgttcagggagctctt
gtgagtgccttggccgatgataccttgcatctctggaatctacgtcagaaaaggcctgca
atactccattctcttaaattcaacaaagaaaggataacattttgccatctgcccttccag
agtaaatggttgtatgttggcacagaaagaggcaatgtacatattgtcaacgtggagtct
ttcacactctcaggctacgttattatgtggaataaagccattgaactatcgtcaaaaact
cacccaggattaattgtacacatcagtgacaaccctatggatgaaggcaagcttttaatt
ggtttcgaatctggaactttggtattgtgggaccttaaatcaaagaagggagagtacaga
tacagctacgatgaggctattcattccgtggcttggcatcatgaaggaaaacagtttgtt
tgcagccattcagatggtagccttactacctggaatgtaaaatctcccattagacccgca
caaattattacaccacatgggaagctgccaaaagatgggaagaaagcagagccttgcaaa
cctatcctcaaagtggaatatagaacctgtaaatctggagatcctttcatcattttctca
ggaggtctgtcctatgatactgtaggcagaagaccgtgcttgactgtgatgcatgggaag
accactgcagtacttgagatggactacccaattgtcgattttctcaccctgtgtgaaacg
ccatatcctagcgattttcaggagccgtatgcggtcgttgtccttctggaaaaggacttg
gtcgttgtggatcttggacaaaacggttatcctatatttgagaacccatatcctttggat
atacacgaatcacctgtcacctgttgcgagtattttgctgactgccctgtggatttaatt
cctgcactttattctgttggggcaaagcagaaacggcaaggatacagtaaaaaggaatgg
cccatcaacggaggtaattggggtttaggcacacagagctacccagagattattattaca
gggcatgcggatggatctttgaagttctgggatgcttcagccataacattgcaagttttg
tataaaatgaaaacatccaaagtattcgaaaagtctcggaataaggaggagaaaccaaac
accgacatagtggatgaagacccttatgccattcagataattacgtggtgtcctgaaagc
agaatgctatgcgtggcaggggtatcagcacatgtaatcgtttacaaattcagcagacag
gaagtgacaacagaggctattcagatgctcgaaatacgcttgctttatgaaataaatgat
ctagaatcaccagaaaccgatcaaataccatctttgggggcaccatgccaggggccaaac
tctcagacagcaaattctcagtctcatccctctacaagcagcagctcatcggatggtctt
cgtgataacgtgccctgcctaaaaattagaagtactccattaaaacaaggggcaggctat
caggctgaagtggtgattcagctggtttgggttaatggcgaacctccgcagcaaataagc
agcctggcagtgaattcatcatatggacttttggtgttcggaaactgtaacggcattgca
atggttgattacattcagaaaactgtactactaaatctgggcacgattgaattatatgga
tcgaatgatccttatcagagacaaccaaagtccccacgcaaaacacggcaaacctcagga
ggtctctgtgatatcaatgagggttcaacaaatttagatgaccgctgcaagtctcccaca
tcaggttctacctcttcttgcaattcagaagatgaacaaaaattgcctaactttatagaa
agggtgaaaatcaaaagcagaaaattatccaagatcgtagtatctgatatagcgaagatg
tcaaggaaactaagcttgccaactgaactgaagcctgacttggatgtgaaagacaactct
ttcagccgttcccggagttccagtgttaccagcattgacaaggagtcccgagaggcaatc
acagctcttcacttctgtgagacttatacccgaaaggcagacacatgtacatcaccatgt
ttgtgggttgggactacacttggcactgtactggtcatagtactgaatctgccacctgga
ggagagcagagacttactcaaccagtcatagtgtctcccagtggaactatattgagactg
aaaggtgcaattttgagaatagcgtttctggacaccaccggaagcctcatcaatccagca
catgaaccctggagagaaccaaatgtgcaagaagagaaggatgacaaggataaatgtaga
aaactgaggccagtatctgtctctccctcatcctctcaggagataaatgaaacccaatat
gcagtgatatgttcagaaaaacaggcaaaagttatctcattaccttcccaaaactgtatt
tataaacacaatataactgaaacatcatttgttcttcgtgctgatattgtgggactgaat
gggagcatctgccttgcatgcttctgtgccaatggacatatcatgacattcagcttgcca
agccttaggccactgctagatgtcaattatttgccactaacagacatgcgaatagctcgt
actttctgtttcaccaacaatggacaggctctatatctggtttcccctactgagatccag
cgcatcacttacagtcaaagcacatgtgagaatttacaggaaatgcttggagaactattc
actcctgtagaaacaccagaagctccaaatagaggattctttaaaggcttgtttggtggt
ggtgcacagtcactggacagagaagaactttttggtgaatctgcagcagggaaaccttca
aggagcctggctcagcatatcccagggactggtggaattgaaggtgtcaaaggagcagct
tctggtgttgcgggtgagctggcacgggccaggatagcacttgatgaaagaggacagaaa
ctaagtgagttggaagaacgaacagcagccatgttatacagtgctgacactttctctaaa
catgctcatgagatgatgttgaagtgcaaagataagaagtggtaccagttctga
DBGET
integrated database retrieval system
