Rhincodon typus (whale shark): 125480938
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Entry
125480938 CDS
T06055
Name
(RefSeq) tubulin alpha-1D chain-like
KO
K07374
tubulin alpha
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04145
Phagosome
rtp04210
Apoptosis
rtp04517
IgSF CAM signaling
rtp04530
Tight junction
rtp04540
Gap junction
rtp04814
Motor proteins
rtp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
125480938
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125480938
09143 Cell growth and death
04210 Apoptosis
125480938
09144 Cellular community - eukaryotes
04530 Tight junction
125480938
04540 Gap junction
125480938
09142 Cell motility
04814 Motor proteins
125480938
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
125480938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtp03019
]
125480938
03036 Chromosome and associated proteins [BR:
rtp03036
]
125480938
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rtp04812
]
125480938
04147 Exosome [BR:
rtp04147
]
125480938
Messenger RNA biogenesis [BR:
rtp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125480938
Chromosome and associated proteins [BR:
rtp03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
125480938
Cytoskeleton proteins [BR:
rtp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
125480938
Exosome [BR:
rtp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125480938
Exosomal proteins of other body fluids (saliva and urine)
125480938
Exosomal proteins of colorectal cancer cells
125480938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
125480938
NCBI-ProteinID:
XP_020391109
LinkDB
All DBs
Position
7:93869481..93883373
Genome browser
AA seq
449 aa
AA seq
DB search
MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEIRSGTYRQLFHPEQLITGKEDAANNYARGHYTIGKELIDLVLD
KLRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQISTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITV
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVTSSEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGADSVEDEGEEEEY
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaatgtatttccatccatgttggccaggcgggtgtccagatgggcaatgcctgc
tgggagctgtactgtttagaacatggtattcaacctgatgggcagatgcccagtgacaag
accatcggagggggagatgattccttcaacaccttcttcagtgagactggtgcgggaaaa
catgtcccacgtgctgtctttgttgatttggaaccaactgtaattgatgagattcgtagc
ggtacctatcggcagctattccaccctgagcagctcatcaccggaaaggaagatgctgcc
aataactatgcccgtgggcactacaccatcggcaaggagctcattgatttggtccttgac
aagctccgtaaacttgctgaccaatgcacaggtctccagggtttcctcattttccacagc
ttcggtggaggcacaggctctggattcacgtccctgctgatggaacgtctctctgttgac
tacggcaagaagtccaaacttgaatttgccatctatccagctcctcagatctccacagct
gtggttgaaccttacaactctatcctgacgacacacaccactctcgaacactcggactgt
gccttcatggtagataatgaagccatctatgatatctgccgcagaaacctggacattgaa
cgcccaacctacaccaatttgaaccgtctgattggtcagattgtgtcctccattacagtg
tctctccgctttgatggtgctttgaatgttgacctgacagagtttcagaccaatttagtt
ccctatccacgtattcatttccctctggctacctatgcccctgtaacgtcatctgagaaa
gcttaccatgagcagctgtctgtggctgagatcaccaatgcctgctttgaaccagcaaat
cagatggtcaagtgtgacccacgccacggcaagtacatggcttgttgcctgctctaccgt
ggtgatgtggtgccaaaagatgtcaatgctgccattgccgccattaaaaccaaacgcact
attcagtttgtggactggtgtccaactggtttcaaggttggcatcaactaccagccccct
acggtggtgcctggtggggacctggccaaggtgcagcgagctgtgtgtatgctaagcaac
accacagccattgctgaagcctgggctcgtctggaccacaaatttgatctgatgtacgcc
aagcgcgcctttgtgcattggtacgtgggtgaggggatggaggaaggggaattctcagag
gctcgtgaagacatggctgccttggaaaaagattatgaagaggtaggtgccgatagtgtt
gaggatgaaggtgaagaagaagaatattag
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