KEGG   Rhincodon typus (whale shark): 125480938
Entry
125480938         CDS       T06055                                 
Name
(RefSeq) tubulin alpha-1D chain-like
  KO
K07374  tubulin alpha
Organism
rtp  Rhincodon typus (whale shark)
Pathway
rtp04145  Phagosome
rtp04210  Apoptosis
rtp04517  IgSF CAM signaling
rtp04530  Tight junction
rtp04540  Gap junction
rtp04814  Motor proteins
rtp05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    125480938
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    125480938
  09143 Cell growth and death
   04210 Apoptosis
    125480938
  09144 Cellular community - eukaryotes
   04530 Tight junction
    125480938
   04540 Gap junction
    125480938
  09142 Cell motility
   04814 Motor proteins
    125480938
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    125480938
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rtp03019]
    125480938
   03036 Chromosome and associated proteins [BR:rtp03036]
    125480938
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rtp04812]
    125480938
   04147 Exosome [BR:rtp04147]
    125480938
Messenger RNA biogenesis [BR:rtp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     125480938
Chromosome and associated proteins [BR:rtp03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     125480938
Cytoskeleton proteins [BR:rtp04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    125480938
Exosome [BR:rtp04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   125480938
  Exosomal proteins of other body fluids (saliva and urine)
   125480938
  Exosomal proteins of colorectal cancer cells
   125480938
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 125480938
NCBI-ProteinID: XP_020391109
LinkDB
Position
7:93869481..93883373
AA seq 449 aa
MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEIRSGTYRQLFHPEQLITGKEDAANNYARGHYTIGKELIDLVLD
KLRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQISTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITV
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVTSSEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGADSVEDEGEEEEY
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgcgtgaatgtatttccatccatgttggccaggcgggtgtccagatgggcaatgcctgc
tgggagctgtactgtttagaacatggtattcaacctgatgggcagatgcccagtgacaag
accatcggagggggagatgattccttcaacaccttcttcagtgagactggtgcgggaaaa
catgtcccacgtgctgtctttgttgatttggaaccaactgtaattgatgagattcgtagc
ggtacctatcggcagctattccaccctgagcagctcatcaccggaaaggaagatgctgcc
aataactatgcccgtgggcactacaccatcggcaaggagctcattgatttggtccttgac
aagctccgtaaacttgctgaccaatgcacaggtctccagggtttcctcattttccacagc
ttcggtggaggcacaggctctggattcacgtccctgctgatggaacgtctctctgttgac
tacggcaagaagtccaaacttgaatttgccatctatccagctcctcagatctccacagct
gtggttgaaccttacaactctatcctgacgacacacaccactctcgaacactcggactgt
gccttcatggtagataatgaagccatctatgatatctgccgcagaaacctggacattgaa
cgcccaacctacaccaatttgaaccgtctgattggtcagattgtgtcctccattacagtg
tctctccgctttgatggtgctttgaatgttgacctgacagagtttcagaccaatttagtt
ccctatccacgtattcatttccctctggctacctatgcccctgtaacgtcatctgagaaa
gcttaccatgagcagctgtctgtggctgagatcaccaatgcctgctttgaaccagcaaat
cagatggtcaagtgtgacccacgccacggcaagtacatggcttgttgcctgctctaccgt
ggtgatgtggtgccaaaagatgtcaatgctgccattgccgccattaaaaccaaacgcact
attcagtttgtggactggtgtccaactggtttcaaggttggcatcaactaccagccccct
acggtggtgcctggtggggacctggccaaggtgcagcgagctgtgtgtatgctaagcaac
accacagccattgctgaagcctgggctcgtctggaccacaaatttgatctgatgtacgcc
aagcgcgcctttgtgcattggtacgtgggtgaggggatggaggaaggggaattctcagag
gctcgtgaagacatggctgccttggaaaaagattatgaagaggtaggtgccgatagtgtt
gaggatgaaggtgaagaagaagaatattag

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