Rhincodon typus (whale shark): 125480970
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Entry
125480970 CDS
T06055
Name
(RefSeq) leucine-rich repeat and fibronectin type III domain-containing protein 1-like protein
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rtp04990
]
125480970
Domain-containing proteins not elsewhere classified [BR:
rtp04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
125480970
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Ortholog
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GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
ig
LRR_5
Ig_2
fn3
LRR_1
LRR_9
V-set
Sp38
C2-set_2
Lmo2446_N_CBM-like
Motif
Other DBs
NCBI-GeneID:
125480970
NCBI-ProteinID:
XP_048474317
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All DBs
Position
39:783616..1046067
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AA seq
676 aa
AA seq
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MERLLFSLLLLSLTVKAQLCPKRCICQNLSPSLSILCAKTGLLFVPPFIDRRTVELRLTD
NFITTVKRKDFANMTSLVHLTLSRNTISQIMPFTFGDLRGLRALHLDSNRLTRVNHEHFN
GLVNLRHLILSNNQLHYIAANSFDDFILSLEDLDLSYNNLENLPWETIGKMTNVNSLSLD
HNLIDFVPEGTFSNLHKLARLDMTSNKLHKLPPDPLFLRVQMFAKTKGSPLSSLVLSFGG
NPLHCNCELLWLRRLTREDDLETCASPPHLMGKYFWFIPEEEFTCDSPLITRHTSKTFVM
EGQQATLKCKAVGDPDPFIHWISPDERLISNSSRAITRENGTLHILIATPKDSGTFTCIA
SNAGGEAMAQVELIVNPLPHFANSTNNIKEPDPGSSDITTSAKSGSPPVANDTKTTQEKK
VIATDLTSSSVQIRWPSQRNIPGIRMYQVQYNSSSDDVLVYRMIPSSSKTFIVKDLVAGR
DYDLCVLAVYDDGITTLTATRAVGCVQFTTEKEYTQCQSMHTQFLGGTMIIIIGGIIVAS
VLVFIIILMIRYKVYNNTGEHKTKVSNVYSQTNGSQNGAMPPSTSKRMESREEHVQEMLP
DAPKGTLAVALTTDYDKVSVTQSPSFPTEDITPHKRRRTRTELLKDAPFPSKEIQGEDQG
STSTKLQIPNFFEDYV
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggagaggctcctcttctctctgctcctgctcagtttgactgtgaaggctcagctttgt
ccaaagcgctgcatctgccaaaacctctccccttccctctcgatcctctgtgccaaaact
gggctcctctttgtgcctccatttatcgacaggaggacggtggagctgcgcctaaccgac
aacttcattaccacggtgaagaggaaagactttgccaacatgacgagccttgtccacctc
acgttgtcgaggaatacaatcagccagatcatgcctttcacttttggtgacctccgaggt
cttcgagctctacacctggatagtaacaggctgaccagagtcaaccacgagcacttcaat
ggcctagtcaatctccgacacctgatccttagcaacaatcagctgcattacattgcagcc
aactcatttgatgactttatcttatctcttgaagatctggatctctcctacaacaaccta
gagaatctgccttgggaaactattggaaaaatgacaaatgttaactccctcagtctggac
cacaacctgattgactttgttcctgaagggacattttccaatcttcacaaattggctcga
ttggatatgacatccaacaaacttcacaagttacctcctgatcccctctttctaagagtc
caaatgtttgcaaagacaaaaggctccccactctcttctctggtacttagctttggtgga
aatccattgcactgtaactgtgagctactctggttgagacgcctcacaagggaggatgat
ctggaaacttgtgcctcgccacctcacttaatgggtaaatatttctggttcatccctgag
gaggaatttacttgcgattctccactcatcacacgacatacttctaaaacgtttgtcatg
gaaggtcagcaggcgacgttgaagtgtaaagcagtgggagaccctgacccattcattcac
tggatctcaccagatgaacgactgatctcgaattcatccagggccatcacccgtgagaat
ggaaccctgcatatcctaattgccaccccaaaagacagtggcacgttcacctgcattgcc
tccaacgctggtggcgaggccatggcccaagtggagttgattgtgaatcctctaccccat
tttgccaacagcacaaataacatcaaggaaccagatcccggttcatctgacatcaccact
tctgccaagtcaggttccccaccagtagctaacgacacaaaaaccacgcaggagaagaag
gtcattgcaactgacctcacatcgtcctccgtacagattcgttggccctcacagcgaaat
attccaggaatccgaatgtaccaagtccagtataatagctcgtctgatgatgtacttgtc
tacagaatgattccatcttctagcaaaacgttcattgtgaaagacttagtcgctgggcga
gactatgacctgtgcgttctagctgtctatgatgatgggattaccactttgactgcaaca
cgagctgtgggctgtgtacagttcaccacagagaaggagtacacacagtgtcaatccatg
catacccagttccttggtgggaccatgatcatcatcattggtggcatcattgtggcctct
gtattggtcttcatcatcatccttatgatcaggtataaagtctacaataacactggggaa
cacaagactaaggtcagtaacgtctactcacagaccaatggaagtcagaatggggccatg
ccaccatcaacctcaaaacgaatggaaagtcgagaggaacatgtccaggagatgttgcca
gatgctcccaaaggaacattggctgtggctttaactacagattatgataaagtctctgtc
actcaaagcccatcttttcccacagaggatataactcctcataagcgaaggagaactcgg
acagagctgctgaaagatgcgccattcccttcaaaggagattcaaggggaggaccaaggt
agcacatcaacaaaactgcaaattcccaatttctttgaagattacgtgtaa
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