Rhincodon typus (whale shark): 125481039
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Entry
125481039 CDS
T06055
Name
(RefSeq) gastrula zinc finger protein XlCGF7.1-like
KO
K09191
general transcription factor IIIA
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
125481039
03021 Transcription machinery [BR:
rtp03021
]
125481039
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
125481039
Transcription machinery [BR:
rtp03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
125481039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2_15
C2CH-3rd_BIRD-IDD
zf_UBZ
zf-met
zf-C2H2_6
zf-C2H2_ZN142
zf-C2H2_8
zf-Di19
zf-C2H2_16
Zn_ribbon_8
Cas12f1-like_TNB
Zn_ribbon_19
zf-LYAR
zf-C2HE
DUF2180
DUF7630
zf-BED
zf-C2H2_7th_ZNF462
zf-C2H2_FBX41
Zf-C2H2_ZNF451
Zn_ribbon_Elf1
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
125481039
NCBI-ProteinID:
XP_048475000
LinkDB
All DBs
Position
42:complement(5275701..5279453)
Genome browser
AA seq
253 aa
AA seq
DB search
MDRQKDVSTTDKPWKCGDCGKGFSYPSKLEAHRRSHTGERPFTCSDCGKGFTQLSTLLSH
QRVHTGDRPFTCSVCGKGFAKSSTLTEHQRVHTGERPFSCSHCGKRFGRSSNLTEHLRIH
TGDRPFTCPVCGKGFTCLTNLTSHQLIHTDKRPFQCSDCDSSFKSTRDLLTHQRSHTGEK
PFICSECGKGFTHTSNLLAHQRRHTGERPFSCSKCGKRFRRSSDVLSHQRAHMGRMRSAA
LFVGGESLSHPTS
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atggaccgacaaaaggacgtaagcactacagacaaaccatggaaatgtggggactgcggg
aagggattcagttacccatccaagctggaagcccaccgacgtagtcacactggagagaga
ccattcacctgctctgactgtgggaaggggttcactcagctatccactctactgtcacat
cagcgagttcacactggggatagaccgttcacctgctctgtgtgtggcaagggattcgcc
aagtcatccaccctcactgagcaccagcgggtgcacactggggagaggccgttcagttgc
tctcactgtgggaagagattcggacgatcatccaacctcactgagcatctccgtattcac
acaggggacaggccgttcacctgtcctgtgtgtgggaagggattcacttgtttaactaat
ctgacatcacatcagcttattcacaccgataagagaccctttcaatgttctgactgtgac
tccagctttaaaagcacgagggacctgctgacacaccaacgtagtcacactggggagaag
cccttcatctgctcagagtgtgggaagggattcactcacacgtccaacctgctggcacac
cagcgacgccacaccggagagaggccgttcagctgctccaagtgcgggaagcggtttcgc
cgctcatctgacgttctgagtcaccagcgagctcacatgggcaggatgcgttcggctgct
ctgtttgtgggtggggagtcgctcagtcaccccacctcctga
DBGET
integrated database retrieval system
