Rhincodon typus (whale shark): 125481803
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Entry
125481803 CDS
T06055
Name
(RefSeq) gastrula zinc finger protein XlCGF8.2DB-like
KO
K09191
general transcription factor IIIA
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
125481803
03021 Transcription machinery [BR:
rtp03021
]
125481803
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
125481803
Transcription machinery [BR:
rtp03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
125481803
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_15
zf-C2H2_ZN142
zf-met
XPA_N
zf-LYAR
C1_4
Zn_ribbon_CLPX_N
DUF7565
DUF7838
Cas12f1-like_TNB
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
125481803
NCBI-ProteinID:
XP_048449668
LinkDB
All DBs
Position
Unknown
AA seq
247 aa
AA seq
DB search
MSKHQRSNTGERLWKCADCGKGFLYPSQLETHQQSHTGEKPFTCSDCGKGFTSLSRLLIH
QRVHTGEKPFTCFDCGKAFTQSANLQTHQRIHTRKRPFTCSDCGMGFTQSSNLLRHQRVH
TGEKPFTRSECGKAFTQTTQLLIHQRIHTGERPLTCSVCGKGFADWNSPLIHQQVHSGER
PFSCSPCGKGFTCSSNLLRHQSVHTGEKPFNCSECGKAFTPSSKLFTHQRVHKEPQLKDF
AVTLTIK
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaacaccagcgcagtaacactggggagagactgtggaaatgtgcggattgcggg
aagggatttctttacccatcccagctagaaactcaccaacagagtcacactggggagaag
ccattcacctgctcggattgtgggaagggattcacttcactatccaggctactgatacac
cagcgagttcacactggagagaaaccattcacctgcttcgattgtgggaaagcattcact
cagtcagcaaatctgcaaacgcaccagagaatacacactagaaagagaccattcacctgc
tctgattgtgggatgggattcactcagtcatctaacctgcttagacaccagcgagttcac
actggagagaaaccattcactcgctcggaatgtgggaaagcattcactcagacaactcaa
ctgctgatacaccagcgaattcacactggagagagaccattgacctgttctgtgtgtggg
aaaggctttgctgactggaactccccgctgatacaccagcaagttcactctggggagaga
ccattcagctgctctccgtgtgggaagggattcacttgctcatctaacctactgagacac
cagagcgttcacactggggagaaaccattcaactgctctgaatgtgggaaagcattcact
ccatcatccaaactgttcacacaccagcgagttcacaaagaaccacagttgaaggatttt
gctgtcactctcactatcaaatga
DBGET
integrated database retrieval system
