Rhincodon typus (whale shark): 125482321
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Entry
125482321 CDS
T06055
Name
(RefSeq) transforming growth factor beta activator LRRC32-like
KO
K26316
transforming growth factor beta activator LRRC32
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
125482321
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_LRWD1
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
125482321
NCBI-ProteinID:
XP_048450335
LinkDB
All DBs
Position
Unknown
AA seq
628 aa
AA seq
DB search
IEAEALCQNRDLNIIPTGLPFDIWKLDLSVNRIKRLTVENLTLYNSIQYLDLQSNHLEFI
QPGTFASLSHLEVLNLANNLLDLSKYGLGRLPYVKRLELSGNSLYTDVVEDFLKEAPLLE
ELSLARNSITKLSDHTFRGSPSLTHVNLQHNVIIEIESGAFQSLSNLSVLDLAMNSIPCI
SDFDLKQLQVLNLSKNSIEHFLMAESEEEYSLQWLDLSDNNLLYFPAFPRRNRLQHLDLS
RNSVQGLSLPPSHLEGSRNLQMNMTKSSLSLHLTELVYLDLSYNEITSIPWEFFRNMNSL
RFLNLSRNCLHSFVIGEANVLNSLANLDLSSNALLNLSLARGSLNLLDHLHLQDNHLQNL
PSNIFRGLNRIRIISLCNNNVNICWGTHWTTDHEHGCTIFSQINTLRYLYLHNNNIKYLP
PHAFHQTPLVELDLSMNPGMQVHPEALSDLEASLTNLSLKGNKLLSLGVNLSRLSNLRTL
DVSENQLTELTISSRSLSLETVDLRNNQFSTLQQTSMELLNGTLCNLLLSGNPFDCCRST
GVRWLTWVNVPDRWSVLCHYQTKDGYFQAQLFSPRPSLCQEDTQDWATWSLLLLILMIVV
FLTIVVALGCCLARRQKVKRMFLHHVKA
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atagaggcagaagcattatgccagaacagagaccttaacataatccccacgggtctccct
ttcgacatatggaaactggatttatctgttaatcgcattaagaggttgacagtggagaat
ctgactctgtacaactccattcagtacctggatttacaatccaatcacctggagtttatc
caaccagggacctttgccagtctgtctcacctggaggtgcttaaccttgcaaacaacctc
ttggatctcagcaaatatgggcttggcaggctaccatatgtgaaaaggttggagctgtct
ggtaacagtttgtacactgacgttgttgaggattttctgaaagaggcacccttgctcgaa
gagctgtccttggctaggaacagcatcaccaagctctcagaccacaccttccgagggtcc
ccgtctttgacccatgttaacctacagcacaacgtcatcattgagattgagtcgggggcg
tttcaatcgctgtccaatctgtctgtgctcgatttggccatgaactccataccctgcatc
tctgacttcgacctcaagcaacttcaggtcttgaacttgagtaagaacagcattgaacac
ttcctcatggctgaatcggaggaggagtactccctgcagtggttggatctcagtgataat
aatttgctctattttccggcttttcccaggagaaaccgcctccagcaccttgacctgtca
cggaattcagttcaagggctttccttaccaccctcccatctggaaggaagtcggaatctg
caaatgaacatgaccaagtcttctctgtccctccacttgactgaattggtctatttggat
ctgagctacaatgagataacctccatcccatgggaattcttccgaaacatgaactcattg
aggttcctcaacctcagcaggaactgcctgcacagtttcgtcatcggtgaagccaacgtg
ctgaactcgctggccaacctcgacttgagttccaacgcgttgctgaacctgtcgctggcc
aggggtagcctcaacctcctggaccatttgcaccttcaagacaaccacctacagaatcta
ccttccaatatctttaggggcctgaacaggattcggatcattagcctttgtaacaacaat
gtcaacatttgttggggcacccattggaccacggaccacgagcatgggtgcacgattttc
tcccaaatcaatacacttaggtatttatatctgcataacaacaacattaagtacttgcct
cctcatgcctttcatcaaactccacttgtggagctggacctttctatgaatcctggaatg
caggttcatcctgaggctctatccgatctggaggcttcattgaccaacctgtctttgaaa
ggcaacaagcttctttcactgggtgtgaacctttcacgtctttccaatctccggacactg
gacgtgtcggagaaccagttgactgagcttaccatctccagcaggagcttgtcgctagaa
actgtggatctgcgcaacaatcagttcagcaccttgcagcagacctccatggagctgctg
aatgggaccctctgcaacctgctgctctctggcaacccatttgactgttgccggtccacc
ggagtccggtggctgacgtgggtcaatgtgccagacaggtggtccgtgctgtgccattac
cagaccaaagacggatactttcaagcacaattgtttagcccacggcccagtctctgccaa
gaggacacacaagactgggcgacgtggagccttttattgctgatattaatgattgtagta
tttctcaccattgtcgtagctctgggatgctgcctggcacgaaggcagaaggtcaaaagg
atgttcctccaccatgtaaaagcctag
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