Rhincodon typus (whale shark): 125483321
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Entry
125483321 CDS
T06055
Name
(RefSeq) tsukushi-like
KO
K08130
tsukushi
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
rtp00535
]
125483321
Proteoglycans [BR:
rtp00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
125483321
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_14
LRR_RPS2
LRR_Zer-1
LRR_NXF1-5
LRR_EndoS
LRRNT
LRR_9
LRR_R13L1-DRL21
DUF4335
Motif
Other DBs
NCBI-GeneID:
125483321
NCBI-ProteinID:
XP_048454033
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All DBs
Position
6:complement(6381973..6398353)
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AA seq
359 aa
AA seq
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MACSAWLIFVMFLLSCDDSLMTCFPGCHCEVESFGMFSSFSLTKVDCSGVGPQLTGVPIP
LDTSYLDLSSNHLKTISPLMFTGPGYTTLVSLNLSYNEIIGMPSNTFSKLRYLETLDLSH
NSLEVLEEGIFSNLPLGEIDLSANKLHDINLDIFTSKGHGKPLSVDLSDNQITTLVRSLD
KSVPNIYSLDLSGNKLESVSTRYLSNVPLRYLDLGRNIISSIPENAFMGLQELTHLSLRN
LPGLKEIPPNSFKGLQNLQILDLSHCMNLKFLNVAVFEDLSALQELYLEKSGVAALSSNI
LNYLPSIKRISVGTSLLRCGKTAKEGSFHRQFGFVRKEQTLHCLDISGSSDTEYVLKLK
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atggcttgctctgcctggttgatttttgtcatgttcctcctgtcctgtgatgacagcctg
atgacgtgcttcccaggatgtcactgtgaagtggaaagttttggaatgtttagtagtttc
agtctgactaaagttgactgcagtggtgttgggcctcagctcactggtgtccccatacca
ttggatacctcttacctggacttatcttctaaccacttgaagaccatctcccccttgatg
tttacaggacccggctacacaacattggtgagtctcaatcttagctacaacgagattatt
ggcatgccatccaacaccttctctaaactgagataccttgagacacttgacctaagtcat
aattccctggaggtgctcgaagagggaatattttcaaacctgcctcttggagaaattgac
ctcagtgctaacaaactgcatgatatcaatttggatattttcacatccaagggacatgga
aagcccctaagcgtagacctttcagataatcaaataaccactcttgtccgaagtctggat
aaaagtgttccgaatatttatagcctggatttgtcaggaaataaattggagtcagtgtca
acacgttacctttccaatgttccactacgctatcttgatctgggtcgcaacatcatctcc
agtatccctgagaatgctttcatgggactgcaggaactgacccacttatcactacgcaat
cttcctggactgaaggaaatacctcccaatagttttaaggggctacagaatttgcagatc
ttagacttgtcacactgtatgaacttgaaattcttaaacgtagctgtgtttgaagacttg
agcgccctgcaggagctctacctggaaaagtctggagttgcagcattgtcaagtaacatt
ttgaactacctgccttccattaaaagaatctctgttggaaccagtttactgagatgtggg
aagacggcaaaagaaggctcattccatcggcagttcggctttgttcggaaggaacagaca
ctgcattgcttagatattagtgggtcctcagacactgagtatgtcttgaaattgaaataa
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