Rhincodon typus (whale shark): 125483322
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Entry
125483322 CDS
T06055
Name
(RefSeq) gamma-aminobutyric acid receptor subunit gamma-3
KO
K05186
gamma-aminobutyric acid receptor subunit gamma
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04080
Neuroactive ligand-receptor interaction
rtp04082
Neuroactive ligand signaling
rtp04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125483322
04082 Neuroactive ligand signaling
125483322
04519 Cadherin signaling
125483322
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rtp04040
]
125483322
Ion channels [BR:
rtp04040
]
Ligand-gated channels
GABA-A
125483322
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Tugs
Motif
Other DBs
NCBI-GeneID:
125483322
NCBI-ProteinID:
XP_048454064
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All DBs
Position
6:complement(15864694..16412734)
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AA seq
447 aa
AA seq
DB search
MPTKLLAAFLLLSVFQACSRKIEDDEDEDRTVNQTWVLTSKMQDRDATKILNRLLKEYDK
KLRPDIGMKPTVIDVDIYVNSIGPVSSINMEYTIDIFFAQTWIDSRLRFNSTMKIITLNS
NMVGFIWIPDTIFRNSKKADAHWITTPNQLLRIWNDGKILYTLRLTIIAECQLQLQNFPM
DEHSCPLIFSSYGHPSSQLIVAWKRDSVEVHNLQHWHSISQFSYVGFRNTREVVKAESGE
YVVMTLYFDLSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPARTALGITTVLTMTTL
SSIARKSLPKVSYVTAMDLFVTVCFLFVFAALMEYAALNYYTCCKKPTCTRKKKTNYSVL
NLGPASSVITINNSMYWQDFEEACVYECLDGKDCQSFFCCYKECKSGSWRKGRIHVDILK
LDTYSRVFFPTTFLLFNLVYWVGYLYL
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgccaacgaaactactggcagctttcttgttactctcagtcttccaagcgtgttcgaga
aaaatcgaggatgacgaggacgaagaccgcacggtcaaccagacgtgggtgctgacctcc
aaaatgcaagatagagacgcgaccaaaattttaaaccgtctgctgaaggaatacgataag
aaacttcgccctgacattggaatgaaaccaactgttatagatgttgatatttatgtgaac
agtatcgggcctgtgtcatcaattaacatggagtacactattgacatcttcttcgctcag
acttggattgacagtcgtctgaggttcaacagtacaatgaaaattatcactctcaatagc
aacatggttggattcatatggataccagacactatcttcaggaattccaaaaaggcggat
gctcactggatcaccacacccaatcagctgcttaggatatggaatgatgggaaaatcctg
tatactttgaggctgacaataatcgcagagtgtcaactgcagctccagaactttccaatg
gatgaacattcttgtcctctcatcttctccagctacgggcacccatcttcacaactgata
gttgcttggaaaagggattctgttgaggtacacaatctgcagcattggcactcgatctcc
cagtttagttatgtggggttccggaatactcgagaagtggtgaaagcagaaagcggggaa
tacgtcgtcatgacgctatacttcgatttaagtcgaagaatgggatatttcacgattcag
acctacattccctgcatattgactgttgttctatcatgggtttcattctggattaagaaa
gatgcaactccagccaggacagcacttgggattacgacagtgctaaccatgacaacactc
agcagcatagcaagaaaatcactaccaaaggtttcctacgtcactgctatggatttattc
gtcactgtatgctttttatttgtctttgcggcgttgatggaatatgcagccctcaattac
tacacatgctgcaagaaacccacttgtacaaggaagaaaaagacaaattactctgtgctg
aacctggggccggcctcttcagttattaccataaacaattctatgtactggcaggacttt
gaggaagcctgtgtatatgaatgcctggatggtaaagactgccagagcttcttctgctgt
tacaaagaatgtaaatcaggctcatggcgcaaaggacggattcacgtagacattttgaaa
ttagacacatattcacgtgtgttttttccaacaacatttttgctatttaatcttgtctac
tgggttggatacctttacctttaa
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