Rhincodon typus (whale shark): 125484162
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Entry
125484162 CDS
T06055
Name
(RefSeq) probable G-protein coupled receptor 139
KO
K04282
thyrotropin-releasing hormone receptor
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04020
Calcium signaling pathway
rtp04080
Neuroactive ligand-receptor interaction
rtp04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
125484162
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125484162
04081 Hormone signaling
125484162
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
rtp04030
]
125484162
G protein-coupled receptors [BR:
rtp04030
]
Rhodopsin family
Peptide
Thyrotropin-releasing hormone (TRH)
125484162
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srx
Motif
Other DBs
NCBI-GeneID:
125484162
NCBI-ProteinID:
XP_048457628
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Position
10:complement(189015..192393)
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AA seq
326 aa
AA seq
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MHEIPKGLVFAIYYPVLAVIGVPANLAVVVILSRRRCGPSGCITYYLVSMGVTDFLVMVT
AVILNRIAGIYFPSSFLSITPVCRFRAALNMAAIDCSAWLTVAFTFDRFIAISCQQLKIK
YCTEKMASCVIGIVTSLSCIKNIFIYLQLEHRYIINNIPWFCVIKAIYYTSPAWAAYDWI
RSILNPFLPFILILLLNALTVRHILVANRTRQKLRNKGNGDNKSDQEVEKRRKLIVLLFA
ISGSFLLLYLLFFVNILYVRSANLTYSAGSNLQNSTLFIEQSGYMLQLLSSCINPFIYAM
TQSKIRHELKNGVKYPLIIIIKLCKF
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgcacgaaataccaaaaggtctggtgtttgccatttactatcctgtccttgctgtgatt
ggagttccagctaacctggcagttgttgtgatcctgtctcgaagaagatgtggaccttct
ggatgtatcacttattacctggtgtccatgggggtgacagacttcctcgttatggtaacg
gctgtaatattaaaccggattgctggtatttacttcccatccagttttctctcaatcaca
ccagtgtgccgttttcgcgctgccttaaatatggcagccattgactgttctgcctggtta
acggtcgctttcacctttgatcgttttattgccatttcctgtcagcagctgaaaataaaa
tattgcactgagaagatggcatcgtgtgttataggaatcgtgacctcactcagttgtata
aaaaacatttttatatatttgcaactagaacacaggtacatcattaacaatataccttgg
ttctgtgtcataaaagcaatatactatacatcacctgcatgggcggcatatgactggatt
cgatctattttaaacccttttctcccattcattctgattttactgctcaatgccctgaca
gttagacacattctagtggctaacagaacccgtcagaaactccggaacaaaggcaatgga
gacaataaaagtgatcaagaggtggaaaaacgaagaaaattgattgtcttgctattcgcc
atctcaggcagtttccttcttttgtatttgttattttttgtcaatatcctttacgttcga
agtgcaaatcttacttattcggcaggttccaatttgcaaaattccaccttgtttatagaa
cagagcggatatatgcttcagttgttgagctcatgcattaacccatttatttatgctatg
acccagagcaaaatcagacatgagttaaaaaatggggtgaaatatcctctcatcataatc
attaaactttgtaaattctga
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