Rhincodon typus (whale shark): 125484350
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Entry
125484350 CDS
T06055
Name
(RefSeq) probable G-protein coupled receptor 139
KO
K04282
thyrotropin-releasing hormone receptor
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04020
Calcium signaling pathway
rtp04080
Neuroactive ligand-receptor interaction
rtp04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
125484350
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125484350
04081 Hormone signaling
125484350
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
rtp04030
]
125484350
G protein-coupled receptors [BR:
rtp04030
]
Rhodopsin family
Peptide
Thyrotropin-releasing hormone (TRH)
125484350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
Motif
Other DBs
NCBI-GeneID:
125484350
NCBI-ProteinID:
XP_048458517
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All DBs
Position
11:complement(74453695..74456774)
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AA seq
327 aa
AA seq
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MHGIPRGLVFAIYYPILAAIGVPANLAVIVILSRRTCGLSRCILFYLLAMAVTDLLIMVT
VVILNRIVGIYFPFSFLSMTSICSIRAALNFATIDISAWLTVAFTFDRFVAISCQKLKIM
YCTVRTAAWVTIFISAIIGVKNTFMYLVYEPMYIVNNVAWFCGVRAIFYKSPAWAAYDWI
RIILTPCLPFILILLLNALTVRHILAANRARRRLRIQSNGEKQSDPEMEKRRTSIVLLFA
ISGSFILLYLLFFMTIVYARIADLTYSSGYDSSNSTSYFLQQIGYVLQLLSSCINPFIYA
GTQKKFRGELKKGMEYPVNLFVKIFKL
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcacgggataccaagaggtctggtcttcgccatttactacccaatccttgcagctatc
ggagttccagcaaacttggcagtgattgtgatcctctctcgaagaacatgtggtctgtca
aggtgcatccttttctacctgttggccatggcggtgacagatttactgatcatggtcaca
gttgtaatattaaaccggattgttgggatttatttcccattcagcttcctttctatgact
tcaatatgcagcattcgtgcagctttgaatttcgccaccattgacatttccgcctggtta
acagtcgctttcacctttgatcgttttgtggccatttcttgccagaagctaaaaataatg
tattgcactgtgaggacagcagcatgggttacaatattcatttctgcaataattggcgtg
aaaaatacttttatgtatttggtgtatgaacccatgtacatagtgaacaatgtagcctgg
ttctgtggtgtaagagcaatattttataagtcaccagcatgggctgcctatgattggatt
cggatcattttgaccccttgtctcccatttatcctgattttactgctcaatgctctgacc
gtcagacacattctagcagcaaatagggcccgcaggagactccgaatacagagcaatgga
gagaaacagagtgacccagagatggagaagcggaggacatccattgttttactctttgct
atctcgggcagcttcatcctgttgtacttgttattttttatgacgattgtctatgctcga
attgcagacctcacttattcctcaggttatgattccagtaattccacttcatattttctc
caacaaattggatatgtgcttcagttactgagttcctgcatcaatccatttatttacgct
gggacccagaaaaagttcagaggagagttaaagaaggggatggaatatcctgtgaactta
tttgttaaaatatttaagctttga
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