Rhincodon typus (whale shark): 125484711
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Entry
125484711 CDS
T06055
Name
(RefSeq) 5-hydroxytryptamine receptor 3A-like
KO
K04819
5-hydroxytryptamine receptor 3
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
125484711
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rtp04040
]
125484711
Ion channels [BR:
rtp04040
]
Ligand-gated channels
Serotonin (5-HT3)
125484711
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
125484711
NCBI-ProteinID:
XP_048460491
LinkDB
All DBs
Position
13:16926747..16960948
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AA seq
462 aa
AA seq
DB search
MALDSFRTHRSSFLLSMSFICLFQGNFSYLSLSDSDGARFIKTFADVFENTAIRPVKNFS
QPLEINLTIHLHAILGLDEKQEILTTYLWMEQKWFHDFLVWDPSDFGGKELVALPKEKLW
LPDILILEMVDEDKSPETPYLYVHHTGLVIYGKPLRIVSSCNLNILYFPFDIQKCPLTAS
SITFYDKDLKLHIKETSEEITSKSKKIFASKGEWELLQIAASEQTILEDWASYDFISLEV
TMKRRPTFYVVNLLIPSAFLMLTDIVSFYLPAHSFDRASFKMTLMLGYSVFLIIVKDLLP
SNSSHTPLIAIFFLVSLTFMVSSLFETIIIINIIHQNAKQRKPIPSWMRTIILDYGAKLF
WRRGKLPVYHQISRVPQATNITVQDCEMKSSCPEEVEALQALLRRIAEGVEEIKHCLERH
DQEWQLEDTWLQIGHILDCFLHFVYCIFFTAFLLTLAITWLM
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggctctcgacagcttcaggactcatcggagctctttcttgctctccatgtcgttcatc
tgtctgtttcagggtaacttttcctacctcagtctctctgactcagatggagcacgattc
ataaagacgttcgctgatgtttttgaaaatacagcaattcgccctgtgaagaacttcagt
cagccattggaaatcaacctcaccatccacctccatgcgatactcggtctggatgagaag
caagaaattctaacaacatatctatggatggaacagaagtggtttcatgacttcttggtg
tgggacccatcagatttcggcgggaaggaattggtcgctctgcctaaggagaaactctgg
cttcccgatatcctcatccttgagatggttgatgaagacaaatcccccgagaccccatat
ctgtatgtgcatcatacagggctggtcatctatgggaaaccgctgaggatcgtcagttcg
tgtaatctcaatatcttgtactttccatttgacattcaaaaatgtccactgacagcttca
tccatcaccttttatgataaggatttgaaactgcacatcaaagagacctctgaggagata
acgtccaaatccaagaaaatatttgcaagcaaaggagagtgggaactcctccagattgcg
gcatcagagcagacgattctggaggattgggcaagctatgattttatatccttggaagtg
acaatgaagcggaggccaacgttttatgttgtgaacctactcattccgagtgccttcctc
atgctgacagacatcgtgagcttttatctgccggctcacagttttgaccgagcctccttt
aagatgaccctcatgttaggctattcagttttcctcatcattgtgaaggacttgttaccc
agtaactcatcccatactccattgatagccattttcttcctggtgtctctgaccttcatg
gtcagcagcttgtttgagaccatcatcatcataaacattatccaccagaatgcgaagcag
aggaaaccaatcccgtcttggatgcgaaccatcatcctggactatggggcgaagctgttc
tggcgaagagggaaactacctgtgtatcaccagatttcccgtgtcccacaggccaccaac
atcacagtccaagactgtgaaatgaagagttcctgcccagaggaggttgaggctcttcag
gcactgctgcgtaggatcgctgagggagtggaggaaatcaaacattgcctggaacgacat
gaccaagagtggcagctggaagacacgtggctgcagattggtcacatcctcgattgcttt
cttcactttgtgtactgcatattcttcacagccttcttgttaactcttgctattacttgg
ctgatgtga
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