Rhincodon typus (whale shark): 125485335
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Entry
125485335 CDS
T06055
Name
(RefSeq) CCR4-NOT transcription complex subunit 2-like isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125485335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtp03019
]
125485335
Messenger RNA biogenesis [BR:
rtp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125485335
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
125485335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
125485335
NCBI-ProteinID:
XP_048463597
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Position
18:complement(42006864..42102007)
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AA seq
283 aa
AA seq
DB search
MFGAARKKFVEGVESDYHDESLYYSQSSMFPHRTEKDMLASPSPSTSGQLSQFGASLYGQ
SALGLPMRGMGNNNPQLNRSLSQGTQLPNHVTPTTGVPTMSLHTPSSPSRSILPMNPRNM
MNHSQVGQGIGIPGRTNSMSSSGLGSPNRSSPSIICMPKQQPSRQPFTVSSMSGFGMNRN
QAFGINNSLSSNIFNGTDGSENVTGLDLSEFPVLADRTRREGSGNPTPLINPLAGRTPYV
RARKGFCFDSSIIKQPPHGKLLSKVPKGFQYLWNCTSAYVVKK
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgctgcgagaaagaagtttgtggagggagtggagagtgattaccatgatgaa
agtctgtattacagccagtcttcaatgttccctcatcgaacagaaaaagatatgctggca
tctccatcaccatcaacatcagggcagctatctcagtttggtgcaagtttatatgggcaa
agtgcattaggccttccgatgaggggaatgggcaacaataacccccagttaaatcgcagc
ttatcacaaggtactcagttacccaatcatgtaacgccaacaacaggagtgccaacaatg
tcacttcatactccatcttcaccaagcaggagcattttgcctatgaatcccaggaatatg
atgaatcattcccaggttggacaagggattgggattccagggaggacaaatagcatgagc
agctctggtttaggcagtccaaacagaagctcacctagcattatatgtatgccaaagcag
cagccatcccggcaaccttttacagtgagcagtatgtctggttttgggatgaacaggaat
caggcttttgggattaataattcactttcaagtaacattttcaatggcacagatggaagt
gaaaatgttacagggttagatctctcagaatttccagtactagcagatagaaccagaagg
gaaggaagcggcaatcccactccactaataaatccgttggcaggaagaactccttatgtg
cgagccagaaaggggttctgctttgattcttcaatcattaagcaacctccacatggaaaa
ttgctcagcaaagtacccaaaggcttccagtatctgtggaattgtacctctgcttatgtc
gtaaagaagtaa
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