Rhincodon typus (whale shark): 125485437
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Entry
125485437 CDS
T06055
Name
(RefSeq) piezo-type mechanosensitive ion channel component 2-like
KO
K22128
piezo-type mechanosensitive ion channel component 1/2
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
125485437
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rtp04040
]
125485437
Membrane trafficking [BR:
rtp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
125485437
Ion channels [BR:
rtp04040
]
Other channels
Mechanosensitive channel (Piezo)
125485437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piezo_TM1-24
Piezo_TM25-28
Piezo_THU9_anchor
THU_Piezo1
Ketoacyl-synt_C
Motif
Other DBs
NCBI-GeneID:
125485437
NCBI-ProteinID:
XP_048464153
LinkDB
All DBs
Position
19:55965086..56135781
Genome browser
AA seq
2321 aa
AA seq
DB search
MAPVPLCGLIFRLLLPLGLLTAISCRYNGLSVAYLIFLLLVPLFSEPTAITMQGHTGRLL
KALTSISFIFLLLHLGSQVMFHYIPNNGTVWENALWHIGVIRLNEVDIGNAIRLVFPDIG
IFIGSLAAFLICRSLLIDAGSHDEAQNLSHSEGKKEGDETESEEETDSEMDSEEDEVEKL
EQDEAEKKPNITHKLAAVIVAIKEMIGHLIMAAGKAVLTILLCFAGIVHPSLISAVYFFT
FLGLCSWWACGHVFSLFFFKRLCLLMVFVSGGHLTAIYLYQLPAFQLPPDQVQMRLLGMT
AVIQTNMSAPWCLMTHHGLHWPVILNPIVLLVLYYTMATIIRQLFLSETGTDLPEVKVYT
AESSSEQIDVEANLQIVECDGDKGNNNCLPVQMYSSPEYTLQSSSAGMEIKDDASGNPPS
SMTIIGHFIMQQSYICALIFMMIWSITYISWMTFVLLIWSCVIWMLRDSQRWAKLSSPLL
TVYGNLLLTQQFITGLELSEAELFPTASNAVLIDFDLKHSNTPCVHLGAKVIYTFTFWIL
LRQHLTEKEEVRKRMQVSLSEINIQGPESAQMDGTLMAVLGSVVKGFLIKYWIYFCTAMF
IIISFHGRVVVHKILYIVLFLFCAALYQVHYDWWRQILRYFWITVVSYSMLVLVTIYTYQ
FQTVSWLFQQKMGMSEDSLKDLGLEQYDTAELFANMLLPATFLLACILQLHYFHDHFLNL
TDWKHVNPRQDNLINRLNNKRSLYTFKKPGFEPKEPSLEQEKGADMKGYPSPWNMVIDRL
TTLILRFMEILHKVQVGLWRLLELHIIKMVSSCIIWITLKEVSLMNYLFLILWVFALPYS
SFRPLASSISTVWACVMIVCKMMYQLKVVKLSTFSANCTLNGSQELQSTSTLYAGPIDPT
YWYGALRKCEDDVLPCLKNHLIILSLLVFEMTVYRHQQYYRLHNGLKTPLTGTLLDNITR
LHLDDGLLDCIKYFTNYFFYKFGLEVCFIAAVHLIGQRMDLYSAIHALWLTVVLCRRRRK
AVAEIWPKYCCFVACIIPFQYLLCIGIPPYLCKDYPWRSTLGLSSNLIKWLYLPDFIKRP
NPIFLMYDFMLLLNISMQRQVFEDENTAAIRMSAGDNVEISRCLDTATVYQYIPVANFLH
CRSYLDMLKVVVFSYLFWFVLCLIFITGTSRINIFCMGYLVACFYFMFFGGQLLLKPVKV
ILRRWDYLIGYTILVIVIKNIFAIGSCVYLKSLLEKNCWMVQTFGMACTIKDYDLPNADD
LLESCEVPNKQAGIIWDSTCFLFLLAQRRVFLSYYFLHVVADLKASKLLAARGAELFEAK
VKKGVTARLEKERLSMEMLKKQMERIRAKQKHQLMATLVPKPGETSHRINRFEAENQGVC
SADGKDRAEDDKKKWWKPWVTHSSMIHSGDYYLFDTDSEDEAKDETGTVEDETVKTSAFQ
FAYIALVKDSKAAVKEKHKELKRAKKVQRMTEDVEQRNRQDLNRADSSEDELDASNVQDP
DNFIKRGVNILTFTWMFVQALLEGLIELLNSVSKDYIDISTVLRFERSILRRELKQGKLS
NQETIHNFYNAKLKCRAPCNPDGVLERDEPTEGEPASTLNYHKMASLDSMLSRDSSVSSC
NTEVTVVSLKPTASDCADDVEEPVSVVPKPSNRIRWRLQKMLNIDIPSSLDYEPPSTLVQ
CARSSTWQGTTETIEEEADEEVAKDIITPQFYHPPSYNAVANSYEYLDLSEENVSVESDK
EVSKMDYQPPLSCETHLLTASDLLLNKVFHDVELEESDKFYRSLPHLLKLLFALYNTMVS
QSDMLCYFVMILNHMVSASVLTMVLPILVFLWAMLSVPRPKKRFWMLAILYTEITVVVKY
CFQFGFFPWTSTSYRMYYFNQPFYLPNIIGIEKKDGYVHYDLIQLLALFLHRSVLKCHGL
WDSHDAVKGQHFEKKQKQSNSQNLGEAQEDNENTQTVSLQDTERGPERKNSSRRLSERVK
APKRSRKKKRESPKAEKRLRDTVKEQIREKTQMAKRYITVIALQIYLPIKEFFYNIIHPE
YNAVCDVYALMFLIDVINFIITIFGYWAFGRYTAVADITESLSEDQVPQVFLVMVLVQFA
TMVVDRALYLRKTVMGKVVFQVVMVLGIHFWMFFILPGVTERRFNRNPVAQLWYFVKCIY
FGLSAYQIKCGYPNRVLGNFLTKSYNYVNLFLFQAFRLVPFLTELRAAMDWVWTDTTLSI
SSWICVEDIYANVFILKCWNESEKRYPQAAGQKKNMLVKYGMGGLIIVSLICIVWFPLLF
MSLVKSVAGVTNQPLDVSVKISIGGYEESSTNTSGIMSLFV
NT seq
6966 nt
NT seq
+upstream
nt +downstream
nt
atggctcccgtccccctgtgtggtttaatcttccgattgttgctgcctctcggtctcctt
acagccatttcttgccggtataatgggctctcggttgcctaccttatcttcctgctcctg
gtgccactgttctccgagcccacggccatcactatgcaaggacacacaggacgtctactc
aaagccttgacttccatcagcttcatctttctgctgttgcatctgggatctcaagtgatg
ttccattacattccaaataatggtacagtttgggagaatgcactctggcacataggagta
atcaggttgaacgaagtcgatattggaaatgccattcgtctggtttttccagacattgga
atatttatcggaagcttggctgcttttctcatctgcaggagcctgttgattgatgcaggc
tcgcacgatgaagctcagaatttgtcccattccgagggcaagaaggagggggatgaaacc
gaatctgaagaagagactgattctgagatggattctgaggaagacgaggttgagaaattg
gaacaagatgaagcagaaaagaaaccaaatatcactcataaactggctgctgtgattgta
gcaattaaagagatgattggacatctgataatggcagcaggaaaagctgttttgactatt
ctgctatgttttgcaggtattgtgcacccatctctcatctctgcagtctacttcttcacg
ttcctggggctgtgctcctggtgggcgtgtgggcatgttttcagcttgttcttcttcaag
cgcttgtgccttttgatggtttttgtcagcggaggacacctgactgcaatctacctttac
cagttacctgcatttcagcttccacctgaccaggttcaaatgaggttgcttggaatgaca
gctgtgatccaaaccaatatgtcagcgccgtggtgtctgatgacccatcatgggctgcac
tggcctgtcattctgaaccccatcgtgctgcttgttctgtactacaccatggcaaccatc
attcggcaactgtttctcagtgagaccgggactgatcttccagaggtgaaagtttacact
gcggaaagctcgtcagaacagatcgatgtagaagccaacctacagattgtcgaatgtgat
ggtgacaaggggaacaataactgtctgccagtccagatgtacagctccccagagtacact
ctgcagtcctccagtgctgggatggaaataaaagatgacgcatctgggaacccacccagc
agcatgacgatcattggccacttcataatgcagcagagttacatctgtgcactcatattc
atgatgatctggagcattacttacatcagctggatgacttttgtccttttgatctggtcc
tgtgtgatctggatgttacgcgacagtcagcgatgggcaaaactgagctctccccttctg
acggtttatgggaacttgctgttaactcaacagttcattacaggcttggagttgagtgag
gctgagctgttccccacagcctctaacgctgtcctgatcgactttgacctgaagcattca
aacacaccgtgcgttcacctgggagctaaggtcatctatactttcaccttttggatctta
ctgcgtcagcacttgactgagaaagaggaagtgagaaaaagaatgcaggtatcgctcagt
gagatcaacattcaggggccagagagtgcacagatggacggtactttgatggcagttctt
ggttctgtggtgaagggatttttgataaagtattggatctacttctgcacagccatgttt
atcattattagttttcatggcagagtcgtggtccataaaattctttacatcgtgttgttt
ctgttctgtgcggcactgtatcaggtacattatgattggtggcgtcaaatcctgaggtat
ttctggatcactgttgtgtcatattcaatgctggtgctagtcacgatctacacctatcag
tttcaaactgtttcttggctctttcagcagaaaatgggaatgtctgaggacagtttgaag
gacctgggcttggagcagtatgacactgctgagctgtttgctaatatgttacttcctgcc
accttcctcctggcctgtattctccagctacattacttccatgatcatttcctcaacctg
acagactggaaacatgtcaatcccaggcaggataacctcatcaatagattgaataacaaa
cgcagcctttacaccttcaagaaacccggctttgaaccaaaggagccaagcttggagcag
gagaagggagcagatatgaaaggatatccaagtccgtggaatatggtgattgacagattg
actaccctaattttacggttcatggaaatactgcataaagtccaagtcgggttgtggaga
ctcctggaactgcacatcatcaagatggtctcttcctgtattatctggatcacgttaaag
gaggtctcattgatgaactaccttttccttattctctgggtgtttgcattaccctattcc
tcattccgtccactagcatccagcatttcgacagtctgggcttgtgtcatgattgtctgt
aaaatgatgtaccagctcaaggttgttaagttatccacattttctgcaaactgcacactg
aatggaagtcaagagttgcagtccacatctactctgtatgctggtcctattgaccctaca
tactggtatggagcgctgaggaaatgtgaagatgatgtcttgccctgtctgaagaatcac
ttgatcatcttgagtttactggtgtttgaaatgacagtttatcgccatcaacagtactat
agactccacaatgggctcaagactcctttaacaggaacgctacttgacaatatcacacgg
ctccatttggacgatgggctgctggactgcatcaaatacttcacaaactacttcttctat
aagtttgggttggaggtctgcttcatagcagccgtacacctcatcgggcagcgcatggac
ttgtactctgcgatccatgccttgtggctaacggttgttctctgcagacgccggagaaag
gccgttgctgagatatggcccaaatactgctgctttgtcgcctgtatcattcctttccag
tatctgctgtgcattgggatccctccttatctctgcaaagattatccctggaggtccacc
ctcggactgagctccaatctcattaagtggctttatctgccagacttcataaagagaccc
aacccaatcttcctgatgtatgacttcatgctactgttaaacatatcaatgcagcggcaa
gtgtttgaagatgagaacacggcagcaatacggatgagtgcaggagacaatgttgaaatc
agccgttgcctggataccgctacagtttatcagtatattcctgtagccaacttcctgcac
tgcaggtcatacttggatatgctgaaagtagttgtgttcagctacttgttctggtttgtg
ctgtgtctaatcttcatcactgggacaagcaggatcaacatcttctgtatgggttacctg
gttgcctgtttctacttcatgttctttggaggacagctgctcctaaaaccagtcaaggtc
atcctcaggcgctgggactatctgataggctacactatcctggtgatagtgataaagaat
atatttgcaattggctcctgtgtctacttgaagagtttgcttgagaagaactgctggatg
gtgcagacgtttggcatggcctgcacgatcaaagattatgatctcccgaatgcagatgat
ttgcttgaaagctgtgaggtcccaaataagcaggcaggcattatttgggacagtacctgc
ttcctcttcctactagcccagaggcgggtcttcctgagttactattttctccatgttgtg
gcagacctaaaggcttccaaactgctggcagcgagaggagctgaactatttgaagctaag
gttaagaaaggagttacagcaagactagagaaagagaggttatccatggaaatgctgaaa
aaacagatggaaaggatcagagcgaaacagaagcaccaactaatggcgacactagtgcca
aaacctggtgagacatcacacagaatcaatcggttcgaagcagagaatcagggagtgtgt
tcagctgatggcaaagacagagcagaagatgacaagaagaagtggtggaagccctgggta
actcattcctcaatgattcacagtggggactattatctgtttgacactgacagtgaggat
gaagctaaggatgaaactggaacagttgaagatgaaacagtaaaaacctcagcattccag
tttgcttacatagccttagttaaagactctaaagcagcagtcaaggaaaaacacaaggag
ctgaagcgggcaaagaaagtacagaggatgacagaagatgtggagcaaagaaatcgacaa
gatttaaacagagctgactcaagtgaagatgaattggatgcttcgaatgtgcaggatccg
gataatttcatcaagcgaggagtgaacattctgaccttcacttggatgtttgtccaagca
ttgcttgaaggactgattgagcttctgaactccgtctccaaggattacattgatatctcc
accgtgctgaggtttgagaggtccattttgagaagagaattaaaacagggaaagctttca
aaccaggagacaattcacaatttttacaatgccaaactgaaatgtcgagctccctgtaat
cctgatggtgtcttggagagagatgagccaacggaaggagaaccagcgtcaacattgaac
taccataaaatggccagccttgattcgatgttgtccagagacagcagtgtgtccagttgc
aacaccgaagtcactgtagtgtccttgaagccgacagccagtgactgtgctgatgatgtt
gaggagccagtctccgtggtcccaaagcccagtaatcgcattcggtggagactgcagaag
atgctcaacattgacatcccctcctcactggactatgagcctccaagtacattggtccag
tgtgccagatcaagtacctggcagggaacaacagaaaccattgaggaagaggcagatgaa
gaggtcgctaaagacattataactccacaattttaccacccaccatcctacaatgcagta
gcaaacagctatgaatatcttgacctctctgaggagaacgtgtctgtggaatcagataag
gaggtgtcaaagatggactatcaacctcctcttagctgtgagactcatctcctaacagca
agtgatctacttctgaacaaggtgttccatgatgttgaactggaagagtcggacaaattc
taccgtagtttgcctcatctcctgaagctgctgtttgccttgtataataccatggtgtcc
cagtctgacatgttgtgctactttgtaatgatcctcaaccacatggtctcagcctcagtg
ctcaccatggtcctacccatccttgtcttcctctgggcaatgctgtcagtgcctagaccc
aagaagcggttctggatgttggctatcctgtacaccgagatcactgttgttgtaaaatac
tgctttcagtttggatttttcccctggaccagcacctcctatcgaatgtattactttaat
cagccattctaccttcccaacatcattggcattgagaaaaaggatggctatgtgcactat
gaccttatccagttgcttgctctgttcctgcataggtcagtcctcaagtgccatggtctg
tgggattcccatgatgcagtgaaggggcagcactttgagaagaagcagaaacaaagcaac
agtcagaacctgggagaggcacaggaggacaatgagaacacacaaacagtgagcctgcag
gacactgaacggggcccagagaggaaaaacagttccaggcgattatcagaaagagtaaaa
gctccaaagagatccagaaagaagaagagggaatccccaaaggcagagaagcgattaaga
gatactgtcaaggagcaaatcagagagaagacacagatggcaaaaagatacattactgtc
atagctcttcaaatctacctgcccattaaagaattcttctacaacattatccatcctgaa
tataatgcagtgtgtgatgtctacgcattaatgttcctcattgacgtcattaacttcatc
atcaccatttttggatattgggcattcggaagatacacagctgtggctgacatcacggaa
tccctctcagaggatcaggtgccccaagtgttcctcgtgatggtattggttcagtttgcc
accatggtggttgaccgtgctctctacctcaggaagaccgtcatggggaaggttgtcttt
caggttgtcatggtacttgggatccatttctggatgttcttcatcctccctggggtgact
gaaaggaggtttaaccgaaacccagttgctcagctttggtactttgttaaatgtatttac
ttcggtttgtcagcgtatcagatcaagtgcggctatcccaacagagtgctcggcaacttc
ttaaccaagagttacaactacgtcaacctcttcctcttccaagcattccgtttggtgccc
tttttgacagagctaagggcagcgatggattgggtatggacagacaccacactcagtatc
tccagctggatttgtgtggaggacatttatgccaacgtgttcatcctgaaatgctggaat
gagtccgagaagagatacccacaagcagctggtcagaagaagaacatgctggttaaatac
ggaatgggtggcctcatcattgtctcgttgatctgcatcgtgtggttcccactgctcttt
atgtcgttggtcaaatctgttgctggagtgaccaatcagcctctggatgtctctgtcaag
atcagtattggtggctatgaggaatcttccaccaacacctctggaataatgagtctgttt
gtatga
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