Rhincodon typus (whale shark): 125485451
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Entry
125485451 CDS
T06055
Name
(RefSeq) transcriptional repressor NF-X1-like
KO
K12236
transcriptional repressor NF-X1
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
125485451
04121 Ubiquitin system [BR:
rtp04121
]
125485451
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
125485451
Ubiquitin system [BR:
rtp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
125485451
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
R3H
zf-NF-X1
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
125485451
NCBI-ProteinID:
XP_048464244
LinkDB
All DBs
Position
2:complement(67820589..67896216)
Genome browser
AA seq
716 aa
AA seq
DB search
MAAPRAGEPPGGLELNPDAADFIPREMQETERKNKPEDFGRNNNTNLSSSRQRPFRSYRS
GLTHKREYSQQSRNHYNEDPASDPRAGSEGHRTNQNKAGMHSFQNQRRHRVREEKSCSGE
TPLANDSQQETVGNLFQSRLFEKNSVEDIAQKDPVEAGAEWVEHRKIHNSDQENWRAPAS
RAGAKPKKVNLHVYKHNRGMVNQGKFTFEKDGRTFGKKTNVMIENMSPPEANQIEHTCEP
SVMDKNYERCNDQSERKFLKNRNSQREFTWGKAYSDHEAYRGSTADNVRTGSSFAMTASA
VDTKTNFNEESVNPKLQDRLTHRTQTWKMSDVERRRKRPEDLQKKSFDLQKKSFDSGRKT
FWKKQMEVHKSKETHTGSLIEQLTSEKYECMVCCEVIRVMVPVWSCQSCYHVFHLNCIKK
WARSPASQAEDGNGGWRCPACQNVSVRVPSSYICFCGKVNNPEWNRNEIPHSCGELCGKK
RSGSDCPHSCNILCHPGPCPSCPAFVTKTCECGRTSQSVRCGQPGTIHCSNVCDNLLICG
KHTCAQVCHAGKCQPCPLTVKQGCYCGATFREVPCGTDKEAYDGTGYFSCQKPCDTPVLR
KVEAVSKGKQQKKSRCYPPMNREHRRIIHELAEVYGVESVSYDSEPKRNVVITAVKGKSV
CPNVSLTSLIEREMAARPPPPIAHYRQQALKIDNGTVALQKPLKEEPVIDYFDVQD
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggcagccccaagggccggggagcccccaggtggactggagcttaatccagatgctgca
gatttcattcctcgagaaatgcaggaaacagagagaaaaaataaaccagaggattttggc
aggaacaataacaccaatctatcatcatccaggcagcggccatttcgtagctatcgctct
ggtttgacacacaaaagagagtattctcagcagtcaaggaatcattataatgaagaccct
gcctctgatcccagggcaggcagtgaggggcacaggactaaccagaataaagcaggtatg
catagttttcaaaatcaacgacgacaccgtgtaagagaagaaaagtcttgttctggagaa
acaccacttgctaatgattcacagcaggaaaccgttggaaatttatttcaatcaaggtta
ttcgaaaaaaattcagtggaggatatcgcacagaaagacccagtggaggcaggggcagaa
tgggtggagcacagaaagattcataattcagaccaagaaaattggagagcaccagcaagt
cgggctggagccaaaccaaagaaagttaatctgcacgtgtataaacacaatcgaggaatg
gttaaccaaggaaaatttacctttgagaaagatggtagaacatttggaaaaaagactaat
gtaatgattgaaaacatgagccctccagaagctaaccaaatagaacacacttgtgaacct
tctgtaatggataaaaattatgaaagatgcaatgatcagtcagagagaaagtttcttaaa
aatagaaatagccagagagaattcacctggggcaaagcatactctgaccatgaagcatac
agaggttcgactgcagacaatgttaggacaggctccagtttcgccatgactgcttcagca
gtggataccaagactaacttcaatgaggagagtgtgaatcctaaattacaggatcgtttg
acccaccgaacacaaacatggaaaatgagtgacgtagaaagaagaagaaaacgaccagaa
gatctacaaaaaaaatcctttgatctgcaaaagaaatcctttgattcgggaaggaagacg
ttttggaaaaaacagatggaagttcacaagagcaaggagactcacacaggatctctgatc
gaacagctcacatctgagaaatatgagtgtatggtttgctgtgaggtgattcgtgtgatg
gtacctgtctggagctgtcaaagctgttatcatgtgttccacttgaattgcattaagaaa
tgggcaagatcaccagcttctcaagctgaagatgggaatggtggttggagatgtcctgct
tgtcagaatgtttctgtaagagtccccagttcttacatctgcttttgtggtaaggttaac
aatccagagtggaacaggaatgagatacctcacagctgtggagagctttgtggaaagaaa
cgatctggcagcgactgtcctcactcatgtaacatcctttgccatcctggaccatgtcca
tcttgccctgcatttgtgacaaaaacatgtgaatgtggtagaaccagccagtcagttcga
tgtgggcaaccaggaaccattcactgcagtaacgtgtgtgataatctcctaatttgtggg
aagcatacatgtgcccaggtatgccatgcagggaagtgccagccatgtccacttactgtt
aagcaaggctgctattgtggagctactttccgagaagtgccgtgtggaacagataaagaa
gcatatgatggcactggctatttttcttgtcagaagccatgtgacacaccagtacttagg
aaagtggaagctgttagtaagggcaaacagcaaaagaaaagccgttgctatcccccaatg
aaccgggagcatcgcagaatcattcatgagctggctgaagtctatggtgttgaaagtgtc
agttatgacagtgagcccaagcgcaatgttgttatcactgctgtgaagggaaaatctgtg
tgtccaaatgtttcactcacttcattgattgagagagagatggcagcaagaccaccccca
ccaattgcacattacagacaacaagcacttaagattgacaatggaacagttgccctgcaa
aagccgttaaaggaagaaccagtcattgattactttgatgttcaggactag
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integrated database retrieval system
