Rhincodon typus (whale shark): 125486044
Help
Entry
125486044 CDS
T06055
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM33-like
KO
K08883
tripartite motif-containing protein 33 [EC:
2.3.2.27
]
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
rtp01001
]
125486044
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtp04121
]
125486044
Enzymes [BR:
rtp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125486044
Protein kinases [BR:
rtp01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
125486044
Ubiquitin system [BR:
rtp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125486044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
PHD
PHD-1st_NSD
PHDvar_NSD
Motif
Other DBs
NCBI-GeneID:
125486044
NCBI-ProteinID:
XP_048467800
LinkDB
All DBs
Position
25:37698713..37746706
Genome browser
AA seq
583 aa
AA seq
DB search
MTTSGTTGTEKKLSSGDRLHSGAEAIASQHQPATKFGSQSNYSMSFCAIVAEENHTNPGH
TGPFSAASVHNSIPNPTSPTTASLAGANRGPTSPTVATIELIPSVTNPENLPSLPDIPPI
QLDDAGSSTLDNLLSRFISDSHHHPPPLPPPASSSSNPSPGPSAPSPGPAIAALAMANSH
TPVRPSSTSSTGSRGSCSSSGKAQGTERGISVFRPDQVKVKQEPGTEDDVCSFTGASVKH
EHLEDGRRSACMMSSPESSLTPPLSNNLHSESETDIEGLRQVENHVKMETSDKTGSCRQL
NNAVNGKSPIRNFAHRSPRAGGDNSNNKDEDPNEDWCAVCQNGGDLLCCDKCPKVFHLAC
HVPTLLNFPSGEWICTFCRDLSKPEVEYDCDNLYHIKKGKTGPSLAPVDQRKCERLLLYL
YCHEMSIAFQEPVPSSVPDYYRIIKNPMDLSRVKMKLQKKHSQHYQTPENFVADIRLIFK
NCEKFNEVTLLPGVQNGPQALMRTKEREMRTKADSEVAQAGKALESYFETKLQVVYSDRT
FTPLVESDSDHEDEAHISEDSDDDFVQPRRKRLKSDDRPVHIK
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgaccactagtggcactactggtactgaaaagaagttgagttctggtgaccggctgcac
tcgggagcagaagccatagcttcccaacatcaaccagcaacaaaatttggaagtcagagc
aattattctatgtccttctgtgctattgtagcagaagaaaatcatacaaatcctgggcac
acgggaccattttctgcagcctctgtgcacaatagcattccaaatccgaccagccccacc
actgctagtttggctggtgcaaacagagggcccaccagtcccacagttgctacaatagag
ttgattccttcggtgactaacccagagaaccttccttcacttccagatatcccacccatt
cagctggatgatgctggatcgagtacgttagataatttgttgagcagatttatctcggac
agtcatcaccacccaccaccactgccaccaccagcctcctccagttcaaacccatcccct
ggaccctcagcaccatcccctggaccagcaattgcagccttagcaatggctaactcccac
actccagtcagaccctcgagtacttctagcactggtagcagaggcagctgtagctcctct
ggtaaagctcaaggtacagagagggggatctcagtctttcgaccagaccaagtcaaagtg
aagcaagaaccaggcacggaggatgatgtgtgcagttttactggtgcttctgtaaaacat
gagcatttagaagatggccggagaagcgcttgcatgatgagtagtcctgaaagcagcttg
acaccacctctttccaacaacttgcactctgagagtgagactgatatcgaagggcttagg
caagttgaaaaccacgtgaagatggagacttctgacaagacgggaagttgcaggcaactg
aataatgctgtaaatggaaaatcaccaatccgtaactttgcgcatcgctcaccacgagct
ggaggggacaacagcaataataaggatgaagatcctaatgaggattggtgtgctgtatgt
cagaatggtggagatcttctgtgttgtgacaagtgtccaaaggttttccatcttgcgtgt
cacgtacctacacttctcaactttcctagtggggagtggatctgcacgttttgtcgggac
ctgtccaaaccagaagtggaatatgattgtgacaatttgtatcatataaagaagggaaaa
actggaccaagcctggctccagttgaccaaaggaagtgtgagcgtctcctgttatatctt
tattgtcatgaaatgagcatcgcattccaagaacctgttccttcctctgttccggattac
tacagaataattaagaatccaatggatttatccagagtgaaaatgaaattgcagaaaaag
cactcgcaacattaccaaacaccagagaactttgtagctgacattaggctcattttcaag
aactgtgaaaaattcaatgaagttaccctattacctggggttcaaaatggtcctcaagcc
ctcatgaggaccaaagaaagggaaatgagaaccaaggcagattcagaggtagcccaggct
ggaaaggctctagaaagctattttgaaacaaagctacaggtggtttattcagacagaacc
tttacacctctggtagaatcagattccgaccacgaagatgaagctcatatcagtgaggat
tcagacgatgacttcgttcaacctaggcgaaaacggctaaagtctgatgacagaccagtg
cacattaaataa
DBGET
integrated database retrieval system
