Rhincodon typus (whale shark): 125486248
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Entry
125486248 CDS
T06055
Name
(RefSeq) WD and tetratricopeptide repeats protein 1-like
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtp04121
]
125486248
Ubiquitin system [BR:
rtp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
125486248
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
TPR_19
TPR_2
TPR_1
Beta-prop_THOC3
WD40_WDHD1_1st
TPR_11
TPR_17
WD40_Prp19
TPR_16
ANAPC3
Beta-prop_WDR3_1st
TPR_14
Beta-prop_EML_2
TPR_6
Beta-prop_EML
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_WDR3_2nd
TPR_BSK1_C
EIF3I
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR36-Utp21_2nd
TPR_9
Beta-prop_HPS5
Beta-prop_WDR36-Utp21_1st
Barstar
Beta-prop_TEP1_C
TPR_WDR35
Beta-prop_WDR75_1st
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
125486248
NCBI-ProteinID:
XP_048468893
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All DBs
Position
27:13551818..13577355
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AA seq
379 aa
AA seq
DB search
MRGIDRAVTEDVYQDDNRDKGLSDVQNGKSITNGVTNGIHLHSNGFRLSEAWPQSSVPFE
LPLHLERLKQQANDAFSRQQWTQAIQLYSKAIQQAPGNPMLYGNRAAAFMKRKWDGDHYD
ALRDCLKAISLNPSHLKAHFRLARCLFELKYVTEALECLDDFKGRFPEQAHSSACDALDR
DIKAVLFAKTDTSDEKKAGTTTPIRIRSSGRKDSISDDEVILRERGYDYKSRYCGHCNTT
TDIKEANFFGSNGQYIVSGSDDGSFFIWEKETTNLVRVLQGDESIVNCLQPHPKHCFLAT
SGIDPVVRLWSPRPESEDQNERVIEDMEGASQANQRRMNADPLEVMLLNMGYRITGLTNS
GMASDDEENSEGQVQCRPS
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgaggggcatcgacagggcggttacagaagatgtttaccaggatgataaccgagataag
ggactttcagatgtacagaatggaaaatcaataacaaatggagttacaaacggaattcat
ctccacagtaatggcttcaggctgtcggaggcatggccgcaaagcagtgttccctttgaa
ttgccacttcatttagagaggctcaaacagcaagcaaatgatgccttctcccgacaacaa
tggacacaggccatccaactttacagcaaagccattcaacaagcacctgggaaccccatg
ctttatggcaaccgagcagcagccttcatgaagcgcaagtgggatggagaccattatgat
gccctcagagactgcttgaaagcaatttctttgaatccctctcacctgaaggcccacttc
cgcttggcacgctgtttgttcgagttgaaatatgttactgaggctctggagtgcctcgat
gactttaagggccgctttcctgaacaagcccacagcagtgcctgtgatgcattggaccga
gatatcaaggctgtgctctttgcaaagacagacacctctgatgagaagaaagcaggaaca
accaccccaatccgcatccggtcaagcggcaggaaagattctatctctgatgatgaagtg
attctgagggaacgaggttatgattacaagtcacggtattgtggtcactgtaataccacc
acggatattaaagaagccaacttctttgggagtaacggccaatacattgtcagtggttct
gatgatggatccttcttcatctgggagaaagagacaacaaaccttgttcgtgttctgcag
ggtgatgaatcgattgtaaactgtctgcaaccccacccgaagcactgcttccttgcaacg
agtggtattgatcctgtggttcgcctctggagcccacgaccagaaagtgaagatcaaaat
gagcgagtaattgaagacatggagggagcttcacaggcaaatcagcggcgaatgaatgca
gacccccttgaagttatgctcctaaatatgggatacaggatcactggactaaccaacagt
gggatggcttcagatgatgaggaaaactctgaaggccaggtgcagtgccggccaagctaa
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integrated database retrieval system
