Rhincodon typus (whale shark): 125487274
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Entry
125487274 CDS
T06055
Name
(RefSeq) zinc finger protein 541-like isoform X1
KO
K26584
zinc finger protein 541
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtp03036
]
125487274
Chromosome and associated proteins [BR:
rtp03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
MiDAC complex
125487274
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ELM2
zf-C2H2
zf-C2H2_4
zf-C2H2_6
Myb_DNA-binding
DUF7952
zf_C2H2_ZNF292
zf-H2C2_2
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
125487274
NCBI-ProteinID:
XP_048474081
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All DBs
Position
39:complement(2140427..2193978)
Genome browser
AA seq
1436 aa
AA seq
DB search
MDCYSFSDESSLQTEMHLPLLSDSELPIASNIQRQEFIPDPDDIIYAGMTSIDLDSNLET
AEIPGDPFADNVDLSLCTVDKGCDSPKIPSDSTDTDSPPMLLGISPLPQKNSPEKSGGKS
EVKYGGLQKRRRLSARHSPQQAFQECSQCGKSFSSASALSKHYLTHSHERRHVCRICNKA
FKRQDHLSGHLLTHQKNKPYVCMEHGCDKSYCDSRSLRRHYEVQHGLYCQREPFADNSSK
EVDSTEGMLYSQSGQTQTLQCEVGMAQRPTTQVESLSQRSCLPNREMLRPLMSSVSQKVP
CETGASGSKITLHYPTQSHATASVLTSPNICLSERSGAVRQAKFGIMQREHSSGLNCNIT
DPYNRVNPSHFSVADPSVSCVESLDSYVLDSVIPGRPSQPAQYTLESSRPASWPQDVSTN
HTLSRNETGSSRQQSSQDLVWTNNLATYSGSKGSYSYIVPNSQPPEEVSATFSSGALHKL
DSFAQAFTRQNLDIQSNSSVAKNQSENPALSEFDACGNVFRQLLSYKTNLNQWQAFPEQK
RQILQEQYSLHQQHQQQIATSLFTQVYMGDQEASPMQNQDQFQNHMLQLISDTQYNLSQS
QNSVSQSQVLVTQSQHVIAQKIPSQIQNNGTQSHHPSELVQDFQHSLRQEATSPFLQFQA
TKQCQLSKNILSCYPQETECTEQQTGTDLQPALRGISECHKKSKKSPFKGQHSLQSVCEE
EVVQNQLQLQSEQLEGWSLPPCSNKRGRISNKDVCVKHYNIAGKSSKGVSVSRKERQKLD
PNCTAPPSQVAMNSFSVQNSLTRNVEDCLQKASFHASVQDEDIYSLSSMPLEGDGSSSVL
CRDLMSSSTSHNLDENEENFRCERCQGVFHFLKGLNCHTCPREGMGKQLSLEDGIKTQKV
TDNGIEKMEHGGLFFQYLEDKLSALLLKKPLEENVAMPLVIPVSVPVKSAGSKKDGKPVK
SENSPVTPRKSVTTRLTDLMVSSNDTSAQVTETGKQANVNCRGHSKKQRRKRSRPEPLFI
PSPASNQTGVLPGMVLYQSHMRSPVCLADHLLEKNFQPPPYTPPPMLSPIRHGSGLYFNR
ICSLIGSKVPHNTYAPKGILGSVVDGVDGICGISVVKDDSIVTIEPHINIGTRFQAEIPL
LQDKSLLDDSVHPADLVWKPWDDIEMNKITQARVTDLLNLACSSVLPGGGTNLELALHCL
HDTRGDILAALDMLLMKGVRRDSCHPLGDYHYTGTEKWTTAEKKLFNKAICLYNKDFFLM
QKMIKHKTVAQCVEYYYTWKKQLKFEWKRTHLLDEEKIKHEADSPSDGKEIKKLSFLASQ
SMSIPSQTSMNREKLKKKIVRSKPSPSPSVHCQTGAQDKNEKKFTVGNFPCKECTKVFDK
VKSRNAHMKCHRQQEEQERQAEMKRSRIRLKAEPKQEPEETVLVFTSNNISNITTS
NT seq
4311 nt
NT seq
+upstream
nt +downstream
nt
atggattgctacagtttcagcgacgaaagctctctccaaaccgaaatgcatctgcctttg
ctatcagacagtgagttgcccattgcaagtaatatccagagacaagaattcatcccagac
cctgatgatattatttatgcaggaatgacaagtatagaccttgattctaacctggagact
gcagaaattcctggcgatccatttgctgacaatgtagatctatccctgtgtactgtagat
aagggatgtgactccccaaagattcccagtgactccacggacacagattctccacccatg
ttgctaggtattagtcctctccctcaaaaaaatagccctgagaaaagtggaggtaaaagt
gaagtgaaatacggagggctgcagaagagaaggcgtctctccgcaaggcattctccgcag
caagcatttcaggaatgtagccaatgtggaaaatcattcagcagtgccagtgccctgagc
aaacactacctgacgcatagtcacgaacgtcggcatgtctgcaggatctgcaataaggcc
tttaagagacaggaccacttatctgggcatttgttaactcaccaaaaaaataaaccttat
gtttgtatggaacatggatgcgacaagagctattgtgactcccggtccttgcgacgtcac
tatgaagtccagcatggcttgtattgtcagagggaaccctttgctgacaacagcagcaaa
gaagtggactcaacagagggcatgctgtactcccagagcggacaaactcagacccttcaa
tgtgaagtgggaatggcacagaggccgacaacacaggttgagtctctttctcaaagatcc
tgtctgcctaaccgagaaatgctgaggcccctaatgagcagtgtaagccaaaaagtacca
tgtgaaactggtgctagtggaagcaaaattacattgcactatcccacacaaagccatgcc
acagcaagtgtgcttactagcccaaatatttgtttgtcagaaaggtcaggcgctgttaga
caggccaaatttggcataatgcaaagagagcattcttctggtttaaactgtaacataact
gacccatacaacagagtaaatccttctcatttttctgtagcagatcccagtgtctcttgt
gtagaaagtctagactcttatgttttagattcagtgattcctggtagaccttcgcaacct
gcacagtatactttggagtcatcaagaccagcaagttggccacaagatgtgagcacaaat
catacattatcaagaaatgaaactggatccagcagacaacaatcaagtcaagatcttgtg
tggaccaacaacttggcaacgtacagcggcagcaaaggaagctattcttatattgtcccc
aattcccagcctcctgaagaagtttctgccaccttttcaagtggtgctttgcataagctg
gactcatttgctcaagcctttacacgacagaatttggatattcagtcaaattcctctgtt
gcaaagaatcagagtgaaaacccagcactatctgaatttgatgcttgtggaaatgtcttc
agacaacttttgagttacaaaacaaatttgaatcagtggcaagcctttcctgaacagaaa
cgtcaaatactgcaggaacagtattctctgcaccagcaacatcaacagcagatagcaact
tcactgtttacacaggtctacatgggagatcaggaggcctctccaatgcaaaaccaagat
caatttcaaaaccatatgctccagctgatctctgatactcaatacaatctgtctcaatct
caaaactcggtaagccagtcacaggtgctagttacccagtcccaacatgtaattgcccag
aaaattccatcccagatccagaataatggaactcaatctcatcatccctcagaactagta
caagacttccagcattccttgagacaggaagccacttctccatttttacagtttcaagca
acgaaacagtgccaactctccaagaacattctctcttgctatccacaagaaacagaatgt
acagagcagcagacagggactgatttacagcctgcattaaggggaatctcagaatgtcac
aagaaatccaagaagagtccattcaaaggacaacattctcttcagtcagtgtgtgaagaa
gaagttgttcagaatcagcttcagttacagtcagagcagttggaaggttggtcacttcca
ccctgtagcaacaaaagaggcagaatctctaataaagatgtgtgtgtaaagcattacaat
attgcaggtaaatccagtaaaggtgtgtcagtttctcgaaaggaacgacagaagttagat
cccaattgcactgctcctcctagtcaggtggctatgaactccttttctgttcagaattct
ttgacgaggaatgtggaagactgtcttcagaaagcatcttttcatgctagtgtacaggat
gaagatatttacagtctttccagcatgccactagagggagatggatcatcatcagttctg
tgcagggacttgatgagtagcagcacttcccataatttggatgaaaatgaagaaaacttc
aggtgtgagagatgtcaaggtgttttccattttctaaaaggattaaactgccacacttgt
ccacgagaaggaatgggaaaacagctttcattggaagacggcattaagacacaaaaggtg
actgataatggaattgagaaaatggaacatggtggattgttctttcaatatctggaggat
aaactcagtgctcttctgctaaagaagccacttgaggaaaatgtggccatgcctttagtg
attccagtgtcagtgcctgtaaaatctgctggttctaagaaagatggcaaacctgttaaa
tctgaaaattcaccagttacaccaaggaaatcggtcacaacaagattgactgatttaatg
gtgtcctcaaatgacacctctgcccaggtcactgaaacaggcaaacaggcaaatgtaaat
tgtaggggccactccaaaaagcaacgaaggaagcgatctcgtccagagcctctctttatc
ccatcaccagcatcaaatcagactggggtgctgccagggatggtgctgtaccagagccat
atgcgttcccctgtttgcttagcagatcaccttctagagaaaaactttcaacctccacca
tacacacctcccccgatgttgagtcccatccgccatggctcaggactttacttcaacagg
atctgttctttgattgggagcaaggtaccacacaatacatatgctcctaaaggaattctg
ggcagtgttgtagatggcgtagatggaatttgtggtatctctgtggttaaagatgactct
atagtcactatagaaccgcatattaacattggaacacggttccaggcagagattccgtta
ctgcaggacaagtcattacttgatgatagcgttcacccagcagatctagtatggaaacca
tgggatgacattgaaatgaataaaatcactcaggcgagagtgacagacctgttgaattta
gcttgttcgagtgtgctgcctggaggaggtaccaatttggaattagctctgcattgccta
cacgacactcggggagacattttggccgccctggatatgttactaatgaaaggtgtaagg
cgagactcttgtcaccccttgggagattaccactacactggtactgagaagtggactact
gcagagaaaaagttgttcaataaagctatttgcctttacaacaaggatttctttctcatg
cagaagatgataaaacacaagaccgtggcacagtgtgtcgaatattactacacctggaag
aaacagctaaagtttgagtggaagcgaacacacttgcttgacgaagagaagataaagcat
gaggcagacagtcccagtgatggaaaagaaataaaaaagctgtcattcttagcctctcag
agtatgagcattccttcccagacaagcatgaacagagaaaaactaaagaagaaaatcgta
cggtctaagcctagcccctctccgtcagttcactgtcagacaggagcccaagacaagaat
gagaaaaagtttaccgtgggaaattttccatgtaaagaatgcacaaaagtgtttgataaa
gtgaaaagtcgaaatgctcacatgaaatgccacaggcagcaggaggagcaggaaagacag
gcagagatgaaacgatcgaggatacgtttgaaagctgagccaaagcaggaaccagaggag
acagtcctggtcttcacctccaacaatatttcaaacattaccacatcataa
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integrated database retrieval system
