Rhincodon typus (whale shark): 125487524
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Entry
125487524 CDS
T06055
Name
(RefSeq) probable G-protein coupled receptor 139
KO
K04282
thyrotropin-releasing hormone receptor
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04020
Calcium signaling pathway
rtp04080
Neuroactive ligand-receptor interaction
rtp04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
125487524
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125487524
04081 Hormone signaling
125487524
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
rtp04030
]
125487524
G protein-coupled receptors [BR:
rtp04030
]
Rhodopsin family
Peptide
Thyrotropin-releasing hormone (TRH)
125487524
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
DUF7535
UL41A
Motif
Other DBs
NCBI-GeneID:
125487524
NCBI-ProteinID:
XP_048475126
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Position
42:complement(9203984..9208954)
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AA seq
325 aa
AA seq
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MHGIPKGLLFAIYYPIIATIGVPANFAVIVILCRSKCGLSRCIIYYLVSMAVTDLLLIIS
AVILNRITGIYFPFSYFSITPICSLRIAVIYAAIDSSAWLTVAFTFDRFVTICCSKVAAQ
YCRKKRTAWIIGTICMLSCLRNSFLYFIFEPLYIINNVGWFCRIKLTYYTSPAWAIYDWL
LVILTPCFPFILILLLNALTIRHILAANRARKRFRTPNNGEKQSDTEMEKRRKSIVLLFA
ISGSFILLYTLYFMTIVYVRIVNVSYFTGSDVSETTFSLEEIGYMLQLSSSCVNPFIYAG
TQSKFRMELKNGLTYPCSLIVKLFE
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcacggaataccaaaaggtttgctgtttgccatttactatcccatcattgcaactatc
ggggttccagcaaattttgcagttattgtgattctgtgtcgaagcaaatgcggtctgtcc
agatgtatcatttactacctggtgtccatggcagtcacagatctcttgcttattatctct
gctgtaatattgaaccggatcactggaatttatttcccattcagttatttttccatcaca
ccaatatgtagtcttcgtattgctgtaatctatgcagctattgacagttctgcctggtta
acggtcgcttttaccttcgatcgttttgtgaccatctgttgctcgaaggtggcagcgcag
tactgtagaaagaaaagaacagcatggataataggaacaatctgtatgttgagctgtcta
agaaattcatttttgtactttatatttgaacctttgtatatcattaacaatgttggctgg
ttctgcagaataaaattaacgtactatacatcacctgcatgggccatatatgactggctt
cttgtaattttgactccgtgttttccattcattttgattttgttgctcaatgctctgacc
atcaggcacattctagccgccaacagagcacgcaagagattccggaccccgaataatgga
gagaaacagagtgacacagagatggagaagcggagaaaatctatcgttttactctttgcc
atctctggcagtttcatcctgttatataccttatatttcatgaccatagtttatgtacga
attgtaaatgtttcttatttcacaggttctgacgtcagtgagacaacatttagtctcgag
gaaattggatacatgcttcagctttcgagttcctgtgtaaacccatttatttatgcagga
actcagagtaaattcagaatggagttaaagaatggacttacctatccatgcagtttaatt
gtcaaactatttgaatga
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