Rhincodon typus (whale shark): 125487564
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Entry
125487564 CDS
T06055
Name
(RefSeq) probable G-protein coupled receptor 139
KO
K04282
thyrotropin-releasing hormone receptor
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04020
Calcium signaling pathway
rtp04080
Neuroactive ligand-receptor interaction
rtp04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
125487564
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125487564
04081 Hormone signaling
125487564
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
rtp04030
]
125487564
G protein-coupled receptors [BR:
rtp04030
]
Rhodopsin family
Peptide
Thyrotropin-releasing hormone (TRH)
125487564
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
Motif
Other DBs
NCBI-GeneID:
125487564
NCBI-ProteinID:
XP_048475297
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Position
42:complement(8915164..8919613)
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AA seq
326 aa
AA seq
DB search
MHLSPKGLLFSIYYNFLAAIGIPANLTVIVILYRRRCGLSGCIVYYVVSMALADLLIIVG
NVIINRIAGIYFPFSFLSITPICSLRIVLIYSVIDSSAWLTVAFTFDRFVAICCQKLKIK
YCTELTATWVIGSVCMLSCFKNAFLYFIFEPSYIISNVPWFCVPKLAFSTTQAWAAYDLS
RSILAPCLPFTLIILLNALTVRHILAASQARRRLRTPSNGENKSDPEMEKRKKSIILLFG
ISGSFVLLYSVFFVTVLYVRIAKVAYYSVADYNKSSFILEETGYMLQFLSSCINPFIYAG
VQNKFRDELKNGLKYPPRLLVKLLKS
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgcacttatcaccaaaaggtctgttgttttccatttactataattttcttgcagctatc
gggataccagccaatttgacggtgatcgtgatcttataccgaagaagatgtggtctttct
ggatgtatcgtttactatgtggtatccatggcgctagcagatctcttgatcattgttggt
aatgttattataaaccggattgcgggcatttatttcccattcagctttttatccatcaca
ccaatatgcagtctccgcattgtcctaatttattcagtaatagatagttctgcctggtta
accgtcgctttcacctttgatcgatttgtggccatttgttgccagaagctgaaaatcaaa
tactgtacagaactaacagcgacatgggttatagggagcgtctgcatgctcagctgtttt
aaaaatgcatttttatattttatatttgaaccatcgtacataattagtaacgtaccttgg
ttctgcgttccaaaattagcatttagtaccacccaagcatgggccgcatatgatttgagt
cgttccattctagccccctgcctcccattcactctgattatactgctcaatgctctgact
gtcagacacattttagcggccagtcaagcccgtaggagactccgcaccccaagcaatggg
gaaaataagagtgacccagagatggagaaacggaaaaagtccattattttactctttggc
atttcaggtagttttgttctgctttattcggtattttttgtaacagtgctgtatgtccga
attgcaaaagtagcgtattactcggttgctgattacaataagtcatcctttatcctggag
gaaaccgggtatatgcttcagtttctgagttcctgcatcaatccatttatttatgcgggc
gtccagaataaattcagagacgagttaaagaatggtttgaaatatccgccgagattgctt
gttaaacttttaaagtcgtga
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