Rhincodon typus (whale shark): 125487595
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Entry
125487595 CDS
T06055
Name
(RefSeq) probable G-protein coupled receptor 139
KO
K04282
thyrotropin-releasing hormone receptor
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04020
Calcium signaling pathway
rtp04080
Neuroactive ligand-receptor interaction
rtp04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
125487595
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125487595
04081 Hormone signaling
125487595
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
rtp04030
]
125487595
G protein-coupled receptors [BR:
rtp04030
]
Rhodopsin family
Peptide
Thyrotropin-releasing hormone (TRH)
125487595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
Motif
Other DBs
NCBI-GeneID:
125487595
NCBI-ProteinID:
XP_048475368
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All DBs
Position
42:complement(11467369..11474429)
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AA seq
326 aa
AA seq
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MHASPNGLVFAIYYPILGAMGVPANLVVIVILARRRCGLSECIIYYVISMAVTDLLVIIT
AVILHRTFGIYFPFSFLSITPVCSLLVATIYVALDSSVWLTVAFTFDRFIAICCQKLKIK
YCTKKTTVQIIGIVPPLACVKNIFMYFICEPVYTVENVPWFCRTKPIFYTSPAWTAYDWI
RSILTPCLPFILISLFNALTVRHILASNTTRRKLRTQSIVENQSDPEVEKRQKSIVLLFA
ISGSFIVLNMLYFVTILYVRIADVRYFSDSVFSQTAFNIEEIGYMLQFFSSCTNPFIYAG
TQSKFRFELKREASYQLSRFVKLFKF
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgcatgcatcaccaaatggtctggtttttgccatttattatcccatccttggagctatg
ggtgttccagctaacttagtggtcatcgtgattctggcccgaagacgttgcggcctctct
gaatgtattatttactatgtgatatccatggcagtgacagatctcctggtcattatcact
gcagtgattttacaccggacttttggtatttatttcccatttagtttcttatccataaca
cctgtgtgcagtctacttgttgccacaatttatgtggcactagacagttctgtttggtta
acagttgctttcacctttgatcgatttattgccatttgttgccagaagctaaaaataaaa
tattgtaccaagaagaccacagtgcaaattataggaatagtgcctccactggcctgtgtg
aaaaatatcttcatgtatttcatatgtgaacctgtgtacacagttgaaaatgtaccctgg
ttctgcagaactaaaccaattttctatacatcacctgcatggactgcatatgattggatt
cgttccatactaaccccttgtttgcctttcattcttatttcactgttcaatgctcttact
gtaagacatattctagcatcgaatacaactcgcaggaaactccgcacccagagcatcgta
gaaaatcaaagtgacccagaggtggagaagcgtcaaaagtccattgttttactatttgcc
atctcaggaagtttcattgtgctaaatatgttatattttgtaacgatcctttatgtccgt
attgctgatgtccgatatttctcagattctgttttcagtcaaacagcatttaacattgag
gaaatcgggtatatgcttcagtttttcagttcctgcaccaatccatttatttatgcagga
acccagagtaaattcagattcgagttaaaaagggaggcaagttatcaactgagtcgattt
gttaaattatttaaattttga
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