Rhincodon typus (whale shark): 125487844
Help
Entry
125487844 CDS
T06055
Symbol
rbm8a
Name
(RefSeq) RNA-binding protein 8A
KO
K12876
RNA-binding protein 8A
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03013
Nucleocytoplasmic transport
rtp03015
mRNA surveillance pathway
rtp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125487844 (rbm8a)
09122 Translation
03013 Nucleocytoplasmic transport
125487844 (rbm8a)
03015 mRNA surveillance pathway
125487844 (rbm8a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtp03019
]
125487844 (rbm8a)
03041 Spliceosome [BR:
rtp03041
]
125487844 (rbm8a)
Messenger RNA biogenesis [BR:
rtp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
125487844 (rbm8a)
Spliceosome [BR:
rtp03041
]
Complex C
Other components
EJC/TREX
125487844 (rbm8a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
125487844
NCBI-ProteinID:
XP_048476241
LinkDB
All DBs
Position
46:complement(6003365..6016400)
Genome browser
AA seq
191 aa
AA seq
DB search
MGDAANGGVGGGVHKVFCISVRGEVGQIEGCQAKQLGFRKSIHKLKEKAKKRKGRGFGSE
EGARSRLREDYDSVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNLH
LNLDRRTGYLKGYALVEYETYKEAQAAMEGLNGSELAGQPISVDWGFVRGPPKSKRRSGR
RRSRSPDRKRH
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgggagatgcagccaatggaggggttggcgggggggtgcacaaggtgttctgcatctct
gtcagaggcgaagtgggacagatcgagggttgtcaggcaaagcagctgggcttcaggaaa
agtattcataagctgaaggaaaaggccaagaagcgaaagggacgaggctttggctctgag
gaaggtgctcgttctcgacttcgtgaagactatgattcagtggagcaggacggtgacgaa
ccaggaccacagcgctctgtggaagggtggattctctttgtgacgggggtccacgaagag
gccacagaggaagatattcacgacaaattcgcagaatacggcgaaatcaagaacctgcac
ctcaatctggatcgccgcaccggctaccttaagggctatgctttggtggagtacgagacc
tacaaggaggcccaggcagcgatggagggactgaatggctcggagttggcgggccagccc
atcagcgtggactggggctttgtccgaggaccacccaagagcaagaggcggagtgggcgc
aggaggagccggagtccagatcggaagcgacattaa
DBGET
integrated database retrieval system