Rhincodon typus (whale shark): 125488173
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Entry
125488173 CDS
T06055
Symbol
prpf31
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125488173 (prpf31)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rtp03041
]
125488173 (prpf31)
Spliceosome [BR:
rtp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
125488173 (prpf31)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
IMP2_N
Motif
Other DBs
NCBI-GeneID:
125488173
NCBI-ProteinID:
XP_048477054
LinkDB
All DBs
Position
Unknown
AA seq
499 aa
AA seq
DB search
MSLADELLADLEEAAEEDEESFADEEDEETIEVVEEEMQLDLGVDSVKSIAKLRDSKLFA
EIITKMGDYIGKQRKSSEVTGPVESDPEYKLIVDANNLTVEIDNEINIIHKYVRDKYSKR
FPELESLVPNALDYIRTVKELGNNLDRCKNNENLQQILTNATIMVVSVTASTTQGQTLSE
EELGVIMEACDMALELNQSKHQIYDYVESRMSFTAPNLSIIVGASTAAKIMGIAGGLTNL
SKMPACNIMLLGSQRRNLFVLSSASVLPHTGYIYHSEIVQSLPQDLRKKAARLVAAKCTL
AARVDSFHESAEGKVGYDLKEEIERKFDKWQEPPPVKQVKPLPAPLDSQRKKRGGRRYRK
MKERLGLTEIRKQANRMCFGEIEEDAYQEDLGFSLGTLGKSGSGRVRAAQANEVTKARIS
KSLQRTLQKQSMVYGGKSTIRDRSSGTASSVAFTPLQGLEIVNPQAAEKKVAEANQKYFS
NMAEFLKVKREKEEKLQLF
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgtccctcgctgacgagctcctggccgacctggaggaggctgccgaggaagatgaggag
agtttcgctgacgaggaggatgaggagaccatcgaagtggtggaggaggagatgcagctg
gacctgggggtcgactctgtcaagagcatcgcgaaactccgcgacagcaagctgttcgcg
gagatcatcaccaagatgggagactacatcgggaagcagcggaagtcttcggaagtgaca
ggacccgtggaatccgatcctgaatacaaactcatcgtcgatgcaaacaacctgacagtg
gagattgacaatgagatcaatatcattcacaaatatgtcagagataaatactcgaagcgg
tttccagagctggaatcactggttcccaatgcactggactatatccggactgtgaaggaa
cttggcaacaaccttgatcgctgcaagaataacgagaaccttcagcagatcctcacaaac
gccaccatcatggtggtcagtgtgacggcctccaccacacagggacagacgctgtctgaa
gaggagctcggcgtcatcatggaggcgtgtgacatggccctggaactgaaccagtcaaag
caccagatctacgactatgtggagtcccgaatgtcgttcaccgcccccaacctctccatc
atcgtcggagcttcgacagcagcgaagatcatgggaatagcgggaggtctcaccaacctg
tcaaaaatgcctgcctgtaacatcatgttgctgggttcccagcgcaggaacctcttcgtg
ttgtccagtgcctcggtgctgcctcacacgggctacatctaccacagtgagatcgttcag
tcgctgcctcaggatctccgtaaaaaggcggcccgcctggtggctgcgaagtgcacgctg
gcggcccgtgtggacagcttccatgagagtgctgaggggaaggtgggttatgacctgaag
gaggagatcgaacggaaattcgacaagtggcaggaaccacctccagtcaaacaggtgaag
cccctgcctgcgccgctggacagtcagcgcaagaagcgaggaggacggaggtatcgcaag
atgaaggagagactgggcctgacagagatccgaaaacaggccaaccgcatgtgctttgga
gagatcgaagaggatgcctatcaggaagatctgggcttcagcctggggacgctgggcaaa
tcgggcagtggtagagtgagggcggcacaagccaacgaagtgaccaaggccagaatctcc
aaatcactgcagcgaacgctccagaaacaaagcatggtttacggtggaaaatcaacaatt
cgcgatcgatcatctgggacagcttcaagtgtggctttcaccccacttcagggcctggag
atcgtgaacccccaggcggcggagaagaaagtggctgaagccaatcagaaatatttctcc
aacatggcggagttcctgaaggtgaagagagaaaaggaggagaaactgcagctgttctga
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