PATHWAY: rtr01100 Help Entry rtr01100          Global    Pathway                                 Name Metabolic pathways - Rhizobium tropici Class BRITE hierarchy Pathway map rtr01100   Metabolic pathways Module rtr_M00002   Glycolysis, core module involving three-carbon compounds [PATH:rtr01100] rtr_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:rtr01100] rtr_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:rtr01100] rtr_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:rtr01100] rtr_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:rtr01100] rtr_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:rtr01100] rtr_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:rtr01100] rtr_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:rtr01100] rtr_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:rtr01100] rtr_M00012   Glyoxylate cycle [PATH:rtr01100] rtr_M00015   Proline biosynthesis, glutamate => proline [PATH:rtr01100] rtr_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:rtr01100] rtr_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:rtr01100] rtr_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:rtr01100] rtr_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:rtr01100] rtr_M00021   Cysteine biosynthesis, serine => cysteine [PATH:rtr01100] rtr_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:rtr01100] rtr_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:rtr01100] rtr_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:rtr01100] rtr_M00026   Histidine biosynthesis, PRPP => histidine [PATH:rtr01100] rtr_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:rtr01100] rtr_M00040   Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:rtr01100] rtr_M00046   Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:rtr01100] rtr_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:rtr01100] rtr_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:rtr01100] rtr_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:rtr01100] rtr_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:rtr01100] rtr_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:rtr01100] rtr_M00082   Fatty acid biosynthesis, initiation [PATH:rtr01100] rtr_M00083   Fatty acid biosynthesis, elongation [PATH:rtr01100] rtr_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:rtr01100] rtr_M00091   Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:rtr01100] rtr_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:rtr01100] rtr_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:rtr01100] rtr_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:rtr01100] rtr_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:rtr01100] rtr_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:rtr01100] rtr_M00134   Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:rtr01100] rtr_M00140   C1-unit interconversion, prokaryotes [PATH:rtr01100] rtr_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:rtr01100] rtr_M00149   Succinate dehydrogenase, prokaryotes [PATH:rtr01100] rtr_M00151   Cytochrome bc1 complex respiratory unit [PATH:rtr01100] rtr_M00155   Cytochrome c oxidase, prokaryotes [PATH:rtr01100] rtr_M00156   Cytochrome c oxidase, cbb3-type [PATH:rtr01100] rtr_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:rtr01100] rtr_M00169   CAM (Crassulacean acid metabolism), light [PATH:rtr01100] rtr_M00175   Nitrogen fixation, nitrogen => ammonia [PATH:rtr01100] rtr_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:rtr01100] rtr_M00417   Cytochrome o ubiquinol oxidase [PATH:rtr01100] rtr_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:rtr01100] rtr_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:rtr01100] rtr_M00549   UDP-Glc biosynthesis, Glc => UDP-Glc [PATH:rtr01100] rtr_M00552   D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:rtr01100] rtr_M00555   Betaine biosynthesis, choline => betaine [PATH:rtr01100] rtr_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:rtr01100] rtr_M00621   Glycine cleavage system [PATH:rtr01100] rtr_M00622   Nicotinate degradation, nicotinate => fumarate [PATH:rtr01100] rtr_M00741   Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:rtr01100] rtr_M00793   dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha [PATH:rtr01100] rtr_M00844   Arginine biosynthesis, ornithine => arginine [PATH:rtr01100] rtr_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:rtr01100] rtr_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:rtr01100] rtr_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:rtr01100] rtr_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:rtr01100] rtr_M00909   UDP-GlcNAc biosynthesis, prokaryotes, Fru-6P => UDP-GlcNAc [PATH:rtr01100] rtr_M00919   Ectoine degradation, ectoine => aspartate [PATH:rtr01100] rtr_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:rtr01100] rtr_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:rtr01100] rtr_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:rtr01100] rtr_M00970   Proline degradation, proline => glutamate [PATH:rtr01100] rtr_M00975   Betaine degradation, bacteria, betaine => pyruvate [PATH:rtr01100] rtr_M00988   PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine [PATH:rtr01100] Organism Rhizobium tropici [GN:rtr] Related pathway rtr00010   Glycolysis / Gluconeogenesis rtr00020   Citrate cycle (TCA cycle) rtr00030   Pentose phosphate pathway rtr00040   Pentose and glucuronate interconversions rtr00051   Fructose and mannose metabolism rtr00052   Galactose metabolism rtr00053   Ascorbate and aldarate metabolism rtr00061   Fatty acid biosynthesis rtr00071   Fatty acid degradation rtr00074   Mycolic acid biosynthesis rtr00130   Ubiquinone and other terpenoid-quinone biosynthesis rtr00190   Oxidative phosphorylation rtr00220   Arginine biosynthesis rtr00230   Purine metabolism rtr00240   Pyrimidine metabolism rtr00250   Alanine, aspartate and glutamate metabolism rtr00260   Glycine, serine and threonine metabolism rtr00261   Monobactam biosynthesis rtr00270   Cysteine and methionine metabolism rtr00280   Valine, leucine and isoleucine degradation rtr00290   Valine, leucine and isoleucine biosynthesis rtr00300   Lysine biosynthesis rtr00310   Lysine degradation rtr00311   Penicillin and cephalosporin biosynthesis rtr00330   Arginine and proline metabolism rtr00332   Carbapenem biosynthesis rtr00340   Histidine metabolism rtr00350   Tyrosine metabolism rtr00360   Phenylalanine metabolism rtr00361   Chlorocyclohexane and chlorobenzene degradation rtr00362   Benzoate degradation rtr00364   Fluorobenzoate degradation rtr00380   Tryptophan metabolism rtr00400   Phenylalanine, tyrosine and tryptophan biosynthesis rtr00401   Novobiocin biosynthesis rtr00410   beta-Alanine metabolism rtr00430   Taurine and hypotaurine metabolism rtr00440   Phosphonate and phosphinate metabolism rtr00450   Selenocompound metabolism rtr00460   Cyanoamino acid metabolism rtr00470   D-Amino acid metabolism rtr00480   Glutathione metabolism rtr00500   Starch and sucrose metabolism rtr00511   Other glycan degradation rtr00520   Amino sugar and nucleotide sugar metabolism rtr00521   Streptomycin biosynthesis rtr00523   Polyketide sugar unit biosynthesis rtr00525   Acarbose and validamycin biosynthesis rtr00540   Lipopolysaccharide biosynthesis rtr00541   Biosynthesis of various nucleotide sugars rtr00543   Exopolysaccharide biosynthesis rtr00550   Peptidoglycan biosynthesis rtr00552   Teichoic acid biosynthesis rtr00561   Glycerolipid metabolism rtr00562   Inositol phosphate metabolism rtr00564   Glycerophospholipid metabolism rtr00600   Sphingolipid metabolism rtr00620   Pyruvate metabolism rtr00622   Xylene degradation rtr00623   Toluene degradation rtr00625   Chloroalkane and chloroalkene degradation rtr00626   Naphthalene degradation rtr00627   Aminobenzoate degradation rtr00630   Glyoxylate and dicarboxylate metabolism rtr00633   Nitrotoluene degradation rtr00640   Propanoate metabolism rtr00643   Styrene degradation rtr00650   Butanoate metabolism rtr00660   C5-Branched dibasic acid metabolism rtr00670   One carbon pool by folate rtr00680   Methane metabolism rtr00710   Carbon fixation by Calvin cycle rtr00720   Other carbon fixation pathways rtr00730   Thiamine metabolism rtr00740   Riboflavin metabolism rtr00750   Vitamin B6 metabolism rtr00760   Nicotinate and nicotinamide metabolism rtr00770   Pantothenate and CoA biosynthesis rtr00780   Biotin metabolism rtr00785   Lipoic acid metabolism rtr00790   Folate biosynthesis rtr00791   Atrazine degradation rtr00860   Porphyrin metabolism rtr00900   Terpenoid backbone biosynthesis rtr00906   Carotenoid biosynthesis rtr00907   Pinene, camphor and geraniol degradation rtr00910   Nitrogen metabolism rtr00920   Sulfur metabolism rtr00930   Caprolactam degradation rtr00946   Degradation of flavonoids rtr00997   Biosynthesis of various other secondary metabolites rtr00998   Biosynthesis of various antibiotics rtr00999   Biosynthesis of various plant secondary metabolites rtr01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100

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