Rhizobium tropici: RTCIAT899_CH00060
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Entry
RTCIAT899_CH00060 CDS
T02432
Symbol
gyrB
Name
(GenBank) DNA gyrase, B subunit
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
rtr
Rhizobium tropici
Brite
KEGG Orthology (KO) [BR:
rtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rtr03032
]
RTCIAT899_CH00060 (gyrB)
03400 DNA repair and recombination proteins [BR:
rtr03400
]
RTCIAT899_CH00060 (gyrB)
Enzymes [BR:
rtr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RTCIAT899_CH00060 (gyrB)
DNA replication proteins [BR:
rtr03032
]
Prokaryotic type
DNA Topoisomerases
RTCIAT899_CH00060 (gyrB)
DNA repair and recombination proteins [BR:
rtr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RTCIAT899_CH00060 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
GyrB_insert
Toprim_4
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AGB69445
LinkDB
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Position
8414..10849
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AA seq
811 aa
AA seq
DB search
MTDTSVTDNGGNAEYGADSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVYEVVDNAIDE
ALAGHADIVTVTLNPDGSVTVTDNGRGIPTDIHSGEGVSAAEVIMTQLHAGGKFDQNSYK
VSGGLHGVGVSVVNALSVWLKLKIRRQGKIHEMSFTHGVADAPLKETGDAGDETGTEVSF
MPSSETFTMIEFDYSTLEHRLRELAFLNSGVRILLTDKRHSDVKQEELLYDGGLEAFVSY
LDRAKKPLVQKPVSIRSEKDGITVEVAMWWNDSYHENVLCFTNNIPQRDGGTHMAGFRAA
LTRQITSYADSSGITKKEKVTLTGDDCREGLTAVLSVKVPDPKFSSQTKDKLVSSEVRPV
VESLVNEALSTWLEEHPSEAKVLVGKVVEAAAAREAARKARELTRRKGALDIASLPGKLA
DCSERDPAKSEVFLVEGDSAGGSAKQGRSRENQAILPLRGKILNVERARFDKMLSSQEIG
TLITALGTGIGKDEFNAEKLRYHKIIIMTDADVDGAHIRTLLLTFFFRQMPDLIERGHLY
IAQPPLYKVTRGKSVQYVKDEKALEEYLIGQGTDDVSLRLGNGEVRTGQDLREAIYDALR
LRTLIDNLHSRYNRSVVEQAAIAGALNAEMVSDPARAEALVNDVAKRLDVIAEETERGWT
GAVTGEGGLRFERTVRGVKEVVFLDMALIGSQDARLIDQLGARLKEVYITPPKLVRRDGE
TEISGPRQLLDTIFAGGRKGLTLQRYKGLGEMNAEQLWETTLDPNVRSLLQVRVTDATDA
DGLFARLMGDEVEPRREFIQDNALNVANLDI
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacacatccgtaaccgataatggtggcaacgccgagtatggcgcagattccatc
aaggtcctgaaaggcctcgatgcggtgcgtaagcgtcccggcatgtatatcggcgatacg
gatgacggttcgggtctgcatcacatggtctacgaagtcgtcgacaacgccattgacgaa
gccttggccggccatgccgatatcgtaacggtgacgctcaatcccgacggctcggtcacg
gttaccgataacggccgcggcatcccgacggatattcatagcggcgaaggtgtttcggcg
gctgaggttatcatgacccagcttcatgccggcggtaagttcgaccagaattcctataag
gtttccggcggcctgcatggcgtcggcgtttcggttgttaacgcgctgtctgtctggctg
aagctgaagatccgccgccagggcaagatccatgaaatgagcttcacccatggcgtggcg
gatgcaccgctgaaggaaacgggtgatgcgggcgacgagaccggcaccgaagtcagcttc
atgccgagctccgaaaccttcaccatgattgagttcgattacagcacgctcgagcatcgt
ctgcgcgaactcgcttttctgaattccggtgttcgcatccttttgaccgacaagcgtcat
tccgacgtcaaacaggaagagttgctttacgacggcggcctggaagccttcgtctcctat
ctcgatcgcgccaagaagccgctggttcaaaagccggtttcgatccgcagcgagaaggac
ggaatcaccgtcgaagttgcgatgtggtggaacgacagctaccacgaaaacgtactctgc
ttcaccaacaacattccgcagcgcgacggcggcacccacatggccggtttccgcgctgcc
ctgacgcgccagatcacctcctatgcggacagctcgggcattaccaagaaggaaaaggtg
acgctgaccggcgacgactgccgcgaaggcctgacggccgtgctgtcggtcaaggttccc
gatccgaaattctcgtcgcagaccaaggacaagctggtttcctccgaagttcgccccgtc
gtcgagagcctggtcaacgaagccctcagcacctggctcgaggaacatccgtccgaagcc
aaggttctggtcggcaaggtcgtcgaagccgctgccgcccgtgaagcggcccgcaaggcg
cgcgaactgacccgccgcaagggcgcgcttgatatcgcctcgctccccggcaagcttgcc
gactgctcagagcgtgatcccgccaagtccgaagtcttcctcgtcgagggcgactcggca
ggcggttcggccaagcagggccgttcgcgtgaaaaccaggccatcctgccgctgcgcggc
aagatcctgaacgtcgagcgcgctcgcttcgataagatgctgtccagccaggaaatcggc
acgctgatcaccgcgctcggcaccggcatcggcaaggacgaattcaacgccgaaaagctc
cgctatcacaagatcatcatcatgacggacgcagacgtcgacggcgcgcatattcgcacg
ttgctgctgaccttcttcttccggcagatgcccgatctcatcgagcgcggccatctctat
atcgcccagccgccgctctataaggtgacgcgtggcaagtcggtgcaatatgtcaaggac
gagaaggcgctggaagaatatctgatcggccagggcacggacgatgtgagcctgcgcctc
ggcaacggcgaagtccgtaccggtcaggatctgcgcgaggcgatctatgacgcgcttcgt
ctgcgcacgctgatcgacaatctgcattcccgctataatcgctctgtcgtcgagcaggcg
gcaattgcaggcgctctcaatgccgaaatggtcagcgatcccgcgcgtgcggaggcgctc
gtcaatgatgttgccaagcggctagatgtcatcgccgaggaaaccgagcgcggctggact
ggtgctgtgacgggcgagggcggcctgcgctttgagcgcaccgtacgcggcgtcaaggaa
gtcgtcttcctcgacatggcgctcatcggttcgcaggatgcccgccttatcgatcagctc
ggcgcgcggttgaaggaagtctatatcacaccgccaaagctcgttcgccgcgatggagag
acggagatttccggccctcgccagctgctggatacgatcttcgccggcggtcgcaagggg
ctgacgctgcagcgttataaaggtctcggcgaaatgaatgccgagcagctctgggaaacg
acgctcgacccgaacgtccgctcgctgctgcaggtgagggtcacggatgcgaccgatgca
gacggcctctttgcccggctcatgggcgatgaggtcgagccgcggcgtgagttcattcag
gacaacgcgctgaacgtcgccaatctcgacatctga
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