Rhizobium tropici: RTCIAT899_CH00465
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Entry
RTCIAT899_CH00465 CDS
T02432
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rtr
Rhizobium tropici
Brite
KEGG Orthology (KO) [BR:
rtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rtr03016
]
RTCIAT899_CH00465
Enzymes [BR:
rtr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
RTCIAT899_CH00465
Transfer RNA biogenesis [BR:
rtr03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
RTCIAT899_CH00465
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AGB69520
LinkDB
All DBs
Position
101749..102375
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AA seq
208 aa
AA seq
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MAATIRYHEGDISTEDTARYTGAIAIDTETLGLVPRRDRLCLVQLSPGDGTADIIRIAAG
QTQAPNLVAMLADPTHQKIFHYGRFDIAVLFHTFGVTTTPVFCTKIASRLCRTYTDRHGL
KDNLKEMLEVDISKAQQSSDWAAETLSPAQLEYAASDVLYLHALREKLTQRLLRDGRMDY
ADDCFAFLPTRAKLDLLGWEEADIFAHS
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaccatccgttatcacgaaggcgatatttccactgaggataccgcccgctac
accggcgcgatagccatcgataccgaaactctcggcctcgttccacgccgtgaccgactt
tgcctcgtgcagctttcgcccggcgacggcacggctgacattatccgcattgcggctggc
cagacgcaggcccccaatctcgtcgccatgttggccgacccgacgcatcagaagattttt
cactatggtcgcttcgacatcgccgtgctgtttcacaccttcggcgtcaccacgacaccc
gtcttctgcaccaagatcgcctcgcgcctctgccgcacctataccgaccgtcacggcctg
aaggacaatctcaaggagatgctcgaggtagatatctccaaggcgcagcaatcgtccgac
tgggcggcggaaacgctgtccccggcgcagctcgaatatgccgcctccgacgtgctttat
ctgcatgcgctgcgcgagaagctgacgcaacgcctgctgcgcgatggccgtatggactat
gcggacgactgtttcgcctttctgccgacgcgcgccaagctcgacctccttggctgggaa
gaggcggatatcttcgcgcatagctga
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