Rhizobium tropici: RTCIAT899_CH00475
Help
Entry
RTCIAT899_CH00475 CDS
T02432
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
rtr
Rhizobium tropici
Pathway
rtr03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
rtr00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
RTCIAT899_CH00475 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
rtr03011
]
RTCIAT899_CH00475 (rpsA)
Ribosome [BR:
rtr03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
RTCIAT899_CH00475 (rpsA)
Bacteria
RTCIAT899_CH00475 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
OB_RRP5
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
AGB69522
LinkDB
All DBs
Position
complement(104409..106112)
Genome browser
AA seq
567 aa
AA seq
DB search
MSVTSPSREDFAALLEESFAKNDLAEGYVTKGIITAIEKDVAVVDVGLKVEGRIALKEFG
ARAKDGTLKVGDEVEVYVERIENALGEAVLSREKARREESWIKLEVKFEAGERVEGVIFN
QVKGGFTVDLDGAIAFLPRSQVDIRPIRDVTPLMHNPQPFEILKMDKRRGNIVVSRRTVL
EESRAEQRSEIVQNLEEGQVVDGVVKNITDYGAFVDLGGIDGLLHVTDMAWRRVNHPSEI
LSIGQQVKVQIIRINQETHRISLGMKQLESDPWDGIQAKYPEGKKISGTVTNITDYGAFV
ELEPGIEGLIHISEMSWTKKNVHPGKILSTSQEVEVVVLEVDPTKRRISLGLKQTLENPW
AAFARNHPAGTEVEGEVKNKTEFGLFIGLDGDVDGMVHLSDLDWNRPGEQVIEEYNKGDV
VKAVVLDVDVEKERISLGIKQLGKDAVGDAAASGDLRKNAVVSCEVIAVNDGGIEVKLVN
HEDITSFIRRADLSRDRDEQRPERFSVGQVVDARVTNFSKKDRKIMLSIKALEIAEEKEA
VAQFGSSDSGASLGDILGAALKNRNAE
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtaacttccccctctcgcgaagatttcgcggcccttctcgaagaatcctttgcc
aagaacgatctggctgaaggctacgtcaccaagggcatcatcaccgccatcgaaaaggat
gtcgccgttgtagacgtcggcctcaaggtcgaaggccgcatcgcgctgaaggaattcggt
gcacgcgccaaggacggcacgctcaaggttggcgatgaagtcgaagtctacgtcgagcgt
atcgaaaacgcgcttggcgaagccgttctgtcgcgcgaaaaggctcgccgcgaagaaagc
tggatcaagctcgaagtcaagttcgaagctggcgagcgcgtcgaaggcgtcatcttcaac
caggtcaagggcggcttcaccgtcgatctggatggcgccatcgccttcctgccgcgttcg
caggtcgacatccgtccgatccgcgacgttaccccgctgatgcacaacccgcagcccttc
gaaatcctcaagatggacaagcgccgcggcaacatcgtcgtttcgcgtcgtacggttctg
gaagagtcccgtgccgagcagcgttctgaaatcgttcagaacctcgaagaaggccaggtt
gttgacggcgtcgtcaagaacatcaccgattacggtgcgttcgttgacctcggcggcatc
gacggcctgctgcacgtcaccgacatggcatggcgccgtgtgaaccatccgtcggaaatc
ctgtccatcggccagcaggtcaaggtacagatcatccgcatcaaccaggaaacccaccgc
atctcgctcggcatgaagcagctcgagagcgatccgtgggatggcatccaggccaagtat
ccggaaggcaagaagatctccggtaccgtcacgaacatcaccgactacggtgcgttcgtc
gagctggagccgggcatcgaaggcctcatccacatctcggaaatgtcctggaccaagaag
aacgttcaccccggcaagatcctgtccacgagccaggaagtcgaagtcgtcgttctcgaa
gtcgatccgaccaagcgtcgtatctctctcggcctgaagcagacgctggaaaacccgtgg
gcagcattcgcccgcaaccatccggctggcaccgaagtcgaaggcgaagtcaagaacaag
accgaattcggcctgttcatcggcctcgacggcgatgtggacggcatggttcacctctcc
gacctcgactggaaccgtccgggcgagcaggttatcgaagagtacaacaagggtgacgtc
gtcaaggctgtcgttctcgacgttgacgtcgagaaggaacgcatctcactcggcatcaag
cagctcggcaaggacgcagtcggcgacgcagccgcttccggcgacctgcgcaagaatgca
gtcgtttcctgcgaagtcatcgcagtcaacgacggcggcatcgaagtgaagctcgtcaac
cacgaagacatcacctcgttcatccgccgcgccgatctgtcgcgtgaccgtgacgagcag
cgccctgagcgtttctcggttggtcaggttgtcgacgctcgcgtcaccaacttctccaag
aaggaccgcaagatcatgctgtccatcaaggctctggaaatcgcagaagagaaggaagcc
gttgctcagttcggttcgtccgactcgggcgcttcgctcggcgacatcctgggtgcggct
ctgaagaaccgcaacgccgaataa
DBGET
integrated database retrieval system
