Rhizobium tropici: RTCIAT899_CH00990
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Entry
RTCIAT899_CH00990 CDS
T02432
Symbol
polI
Name
(GenBank) DNA-directed RNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rtr
Rhizobium tropici
Pathway
rtr03030
DNA replication
rtr03410
Base excision repair
rtr03420
Nucleotide excision repair
rtr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RTCIAT899_CH00990 (polI)
03410 Base excision repair
RTCIAT899_CH00990 (polI)
03420 Nucleotide excision repair
RTCIAT899_CH00990 (polI)
03440 Homologous recombination
RTCIAT899_CH00990 (polI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rtr03032
]
RTCIAT899_CH00990 (polI)
03400 DNA repair and recombination proteins [BR:
rtr03400
]
RTCIAT899_CH00990 (polI)
Enzymes [BR:
rtr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RTCIAT899_CH00990 (polI)
DNA replication proteins [BR:
rtr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RTCIAT899_CH00990 (polI)
DNA repair and recombination proteins [BR:
rtr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RTCIAT899_CH00990 (polI)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RTCIAT899_CH00990 (polI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_2
HHH_5
HHH
IMS_HHH
Transposase_20
Motif
Other DBs
NCBI-ProteinID:
AGB69618
LinkDB
All DBs
Position
210631..213663
Genome browser
AA seq
1010 aa
AA seq
DB search
MEVRHAIHASMKKGDHLFLVDGSGFIFRAFHALPPLTRKSDGLPVGAVSGFCNMLWKLLT
SARDTSVGVTPTHFAVIFDYSSKTFRKDIFPEYKANRSAPPEELIPQFGLIREATRAFNL
PCIETDGFEADDIIATYARQAEAAGADVTIISSDKDLMQLVTPMVHMYDSMKDKQIGIPD
VLEKWGVPPDKMIDLQAMTGDSVDNVPGIPGIGPKTAAQLLEEFGDLDTLLARADEIKQQ
KRRENIIANAELARISRQLVTLRTDVPLELALDALVLEPQDGPKLIGFLKTMEFTTLTRR
VAEACDCDAAAIEPSVVKIEWGETAHGPDLDIGENVDLVAGSVVEAGGASVPAPSAKARL
ALDGTTEPEDLAKARAASFASAPIDHSKYVTIRDIATLDRWIADARETGIVAFDTETTSL
DVMQAEIVGFSLAIADNRNDPSGSSIRAAYVPLAHKTGIGDLLGGGLADNQIPLRDALAR
LKDLLEDASILKIAQNLKYDYLLMKRYGIETRSFDDTMLLSYVLDGGANATHGMDSLSER
WLGHKPIAYKDVAGSGKSNVTFDLVDIDRATAYAAEDADVTLRLWLVLKPRLAAEKLSVV
YERLERPLVPVLAHMEERGITIDRQILSRLSGELAQGAAALEDEIYHLAGERFNIGSPKQ
LGDILFGKMGLAGGSKTKTGQWSTSAQVLEDLAAAGFELPRKIVDWRQLTKLKSTYTDAL
PSYVHPETKRVHTSYSLASTTTGRLSSSEPNLQNIPVRTAEGRKIRTAFISTPGHKLVSA
DYSQIELRVLAHVADIPQLKQAFEDGIDIHAMTASEMFGVPVDGMPSEVRRRAKAINFGI
IYGISAFGLANQLSIERSEAGDYIKKYFERFPGIRDYMEGAKQAARDKGYVETIFGRRIH
FPEIRSSNPSVRAFNERASINAPIQGSAADVIRRAMIKMEPALTAAGLGDRVRMLLQVHD
ELIFEVEDADVERTTPIIVSVMENAAMPAVDMAVPLRVDARAAHNWDEAH
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
ttggaagtgcgccacgctatccatgcttccatgaaaaaaggtgatcatctcttcctcgtc
gacggttccggtttcattttccgggcctttcatgctttgccgccgctgacgcgcaagtcc
gacggattgccggtcggcgccgtctccggtttctgcaacatgctgtggaagctgctgact
tcggcgcgcgatacctcggtgggtgtgacgccgacgcattttgccgtgatcttcgactat
tcctcgaagaccttccgcaaggacatcttcccggaatacaaggctaatcgctcggcgccg
ccggaagagctgatcccgcagttcggcctcatccgcgaggcgacccgcgccttcaacctg
ccctgtatcgagactgacggcttcgaggccgacgacatcattgcgacctatgcccgtcag
gcggaggcggctggcgccgatgtgacgatcatctcgtccgacaaggatctgatgcagctc
gtcacccccatggtccacatgtatgacagcatgaaggacaagcagatcggcattcccgac
gtgctcgagaagtggggtgtaccgccggacaagatgatcgatctgcaggccatgaccggc
gactcggtcgataacgtccccggcattcccggcatcggcccgaagacggcggcgcagctt
ctggaggagttcggcgatcttgacacgctgctcgcccgcgccgacgagatcaagcagcag
aagcgccgcgaaaacatcatcgccaatgccgaacttgctcgcatttcgcggcagctcgtg
acgctgaggacggatgtaccgctggaacttgcgcttgacgcgctggtgctggagccgcag
gacggcccgaagctgatcggcttcctgaagaccatggaattcacgaccctgacgcggcgc
gtggcggaggcctgcgactgcgacgcggcggcaatcgagccttccgtcgtcaagatcgaa
tggggcgaaaccgcccacggtcccgatctcgatatcggcgagaatgtcgatcttgttgcc
ggcagcgttgtcgaggccggaggggcatcggttccggcgccgtcggccaaggcgcgtctg
gctttggatggcaccaccgagcccgaggatctcgccaaggcgcgcgccgcaagttttgcg
agcgcgccgatcgaccattcgaaatatgtgaccatccgcgatatcgccacgctcgaccgt
tggatcgcggatgcgcgcgaaaccggcatcgtcgctttcgatacggaaacgacctcgctc
gatgtcatgcaggctgagatcgtcggcttctccctggcgatcgccgacaaccgcaacgat
ccctccggttcttccatccgtgccgcctatgtgccgctcgctcacaagaccggtatcggc
gatctgctgggcggtggcctcgccgacaatcagatcccgctgcgtgatgcgctggctaga
ttgaaggatctgctggaggatgcctccatcctcaagatcgcgcagaacctcaaatacgat
tacctgctgatgaagcgctacggcatcgagacgcggtccttcgacgacacgatgctgctc
tcctatgtgctcgatggcggcgccaatgccacgcatggcatggacagcctctccgagcgc
tggctcgggcataagccgatcgcctacaaggacgtcgccggcagcggaaagtccaacgtc
acgttcgatctcgtcgatatcgaccgcgccaccgcctatgccgccgaggatgccgacgtg
acgctgcgcctctggctggtgctgaaaccacgacttgcggcagaaaaactttcagtcgtc
tacgaacggttggaaaggccgctcgtgccggtgcttgcccatatggaagagcgcggcatc
accatcgaccggcagatcctttcccgcctttccggcgagcttgcgcagggtgccgctgct
ctcgaggacgagatctaccatctggctggcgagcgcttcaatatcggctcgccgaagcag
ctcggcgatatcctgttcggcaagatggggttggccggtggcagcaagaccaaaaccggg
caatggtccacctcggcgcaggtgctggaggatctggcggcggccggcttcgaactgccg
cgcaagatcgtcgactggcgccagctcaccaagctgaaatccacctatacggatgcgctg
ccgagctacgttcatcccgagacgaagcgcgtccacacctcctattcgctggcctcgacc
acgacagggcgcctctcctcctccgagccgaacctgcagaatattccggtgcgcacggcg
gagggccgcaagatccgcacggccttcatttcgacgccgggccacaagctcgtctccgcc
gactacagccagatcgaactgcgcgtgctggcgcatgtcgccgatatcccgcagctcaag
caggccttcgaagacggcatcgacattcacgcgatgacagcatccgaaatgttcggcgtg
ccggtggatggaatgccgagcgaggtgcgccgccgcgccaaggcgatcaacttcggcatc
atctacggcatctccgccttcggcctcgccaaccagctctcgatcgagcgttcggaagcc
ggcgactatatcaagaagtatttcgagcgcttccccggcatccgcgattacatggaaggc
gccaagcaggccgcgcgcgacaagggctacgtcgagacgatcttcggtcgccgcatccac
ttcccggagatccgctcctccaacccttccgtccgcgccttcaacgagcgtgcctcgatc
aatgcgccgatccagggttctgccgccgacgtcatccgccgcgccatgatcaagatggag
ccggcgctgaccgcagccggccttggcgatcgcgtgcgcatgcttctgcaggtgcatgac
gaactgatcttcgaagtcgaggatgccgatgtcgagcgcacgacgccgatcatcgtctcg
gtcatggaaaacgccgccatgccggcggtcgatatggccgtgccgctgagggtcgatgcg
cgcgctgctcataactgggatgaggcgcactga
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