Rhizobium tropici: RTCIAT899_CH01150
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Entry
RTCIAT899_CH01150 CDS
T02432
Name
(GenBank) small-conductance mechanosensitive channel
KO
K22044
moderate conductance mechanosensitive channel
Organism
rtr
Rhizobium tropici
Brite
KEGG Orthology (KO) [BR:
rtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtr02000
]
RTCIAT899_CH01150
Transporters [BR:
rtr02000
]
Other transporters
Pores ion channels [TC:
1
]
RTCIAT899_CH01150
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
AGB69650
LinkDB
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Position
245354..247468
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AA seq
704 aa
AA seq
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MAVFAQNAAATQSATPPPDKVRELIQLLNEPDVRQWLTTQLNSQPASASDKPAPATDPAP
ADGNQMSVLSGMLGHTRHHLELVSGAAMTLPYEVMTASEKLEGEGKSVGLVRIIVQIVLL
FFLGLVAELAVARFINTRHMQRTERAAGTETELQAARFQFLGGVVPAIIHGLVTLVPLLA
FDWPPAIENFAIACVIAMVSIRLAISIGKLVMELIAMRRANDVLDEDGGTARIAERRRVA
SYWYRRCTLFAIYFACGWAIIQAVTSLDFSAGARDLIGYTLGIGLFLIATAAVWSRPLPP
EKRGAKTVSWLLTIFFVALWCLWVAGFDGLLWIGIYAMLLPRVLSVSTRAIEALHDAADG
IFGAGKIAAVLLDRGLRALIITFAALWLGHMLGVEAHAMMSGSESNVGRIARGILGGIII
LLVADLVWQLAKTYIDGKVMQALPAAGDSDEMRASRARLQTLLPIFRNILAVVIGIIAVM
MVLSGLGVQIGPLIAGAGVVGVAVGFGAQTIVKDVISGVFYLWDDAFRIGEYIESGHYKG
VVESFSLRSVKLRHQRGPLATIPFGSLGAVNNMNRDWAIDKIIVKVTYDTDLVKLKRIVK
DIGQRLLEDEDLKPNIIQTLKMKGVEQFGDFAIEIRLAITAKPNELSVIRRSALALIKQS
FDENGIQFAFPTVQVASDKDAAAAAARQLIEMRAANVDGAQQAG
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcttcgcgcagaatgcggccgcaacgcagtcggcaactccgccgcccgacaag
gttcgtgagctgatccagctgctgaatgagcccgatgtcaggcagtggcttaccacgcag
ctcaacagtcagcctgcgtccgccagcgataaacctgcccccgccaccgatccggcgccg
gccgacggcaatcagatgtcggttctatcaggcatgctcggccacacgcggcatcacctc
gagctggtctccggcgctgcgatgactttgccctacgaggtcatgaccgcatcggaaaag
ctggagggggagggcaagtcggtcggcctcgtgcgcatcatcgttcagattgtcctcctg
ttcttcctcggattggtggccgaactcgccgttgcccgtttcatcaacaccaggcatatg
cagcggaccgagagggctgccggtaccgagacggaactgcaggcagcgcgcttccagttt
ctgggcggcgttgtgcccgccatcatccatggcctggtgacgctcgttccgcttcttgcc
ttcgattggccgcctgccattgaaaatttcgccatcgcctgtgtcattgcgatggtatcg
atcaggctggcgatctccatcggcaagcttgtcatggaattgatcgcgatgcgtcgcgcc
aatgacgttctggacgaggacggcggcaccgcccgcatcgccgaacggcggcgcgtggcc
tcctactggtatcggcgctgcacgctgtttgccatctattttgcctgcggctgggcgatc
atacaggccgtcacgtcgctggacttttctgccggtgcgcgcgacctcatcggctacacg
ctcggcatcggtttgttcctgatcgccacggctgccgtgtggtccaggccgcttccgccg
gaaaagcgtggagcaaagaccgtttcctggttgctgacgattttcttcgtggcgctctgg
tgtctctgggtagccggcttcgatggcctcttgtggatcggcatctatgcgatgttgctg
ccacgcgtcctctcggtatccacgcgggcgatcgaggctctgcatgacgcggccgacggc
attttcggcgccggcaagatcgcggccgtattgctcgaccgcggcttgcgggcgctgatc
attacctttgcggctttgtggctcggccacatgctgggggtcgaggcgcatgcgatgatg
agcggcagcgaatcgaatgtcggtcgcatcgctcgcggcattctcggcggcataatcatc
ctcctggtcgccgatctcgtctggcagctggcgaaaacctatatcgacggcaaggtgatg
caagctctgccggcggccggtgattccgacgagatgagggcgagccgcgcccggctgcag
acgctgctgccgatcttccgcaacatccttgccgtcgtcattggcattatcgccgtcatg
atggtgctgtctggcctcggcgttcagatcgggccgctgatcgccggcgccggtgtcgtc
ggtgtcgccgtcggcttcggtgcacagacgatcgtcaaggatgtcatcagcggcgtcttc
tacctctgggacgatgccttccgcatcggcgaatacatcgaaagcggccattacaagggc
gtagtcgaatccttcagcctgcgctcggtcaagctgcgccaccagcgcggcccattggcg
acgatccccttcggttcgctcggtgcggtcaacaacatgaaccgcgactgggcgatcgat
aagatcatcgtcaaggtcacctacgataccgatctcgtgaagttgaagcgcatcgtcaag
gatatcggccagcggctgctcgaagacgaggacctgaaaccgaacatcatccagacgctg
aagatgaagggcgtcgagcagttcggcgatttcgcgatcgagatcaggctggcgatcacc
gccaagcccaacgagctctccgtcatccgccgcagcgcgctggccttgatcaagcagtcc
ttcgacgaaaacggcatccagttcgccttccccaccgtgcaggtggcaagcgacaaggac
gctgctgccgccgctgcccggcagcttatcgagatgcgggcggcaaatgtggatggcgcg
cagcaggcgggctag
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