Rhizobium tropici: RTCIAT899_CH01470
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Entry
RTCIAT899_CH01470 CDS
T02432
Symbol
lpsB2
Name
(GenBank) dTDP-glucose 4,6-dehydratase protein
KO
K24300
UDP-N-acetylglucosamine 4,6-dehydratase [EC:
4.2.1.135
]
Organism
rtr
Rhizobium tropici
Pathway
rtr00541
Biosynthesis of various nucleotide sugars
rtr00552
Teichoic acid biosynthesis
rtr01100
Metabolic pathways
rtr01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
rtr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
RTCIAT899_CH01470 (lpsB2)
00552 Teichoic acid biosynthesis
RTCIAT899_CH01470 (lpsB2)
Enzymes [BR:
rtr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.135 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining)
RTCIAT899_CH01470 (lpsB2)
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GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
CoA_binding_3
adh_short
KR
NAD_binding_10
NAD_binding_4
CoA_binding
PglD_N
Motif
Other DBs
NCBI-ProteinID:
AGB69713
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All DBs
Position
309700..311682
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AA seq
660 aa
AA seq
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MVPADKLVLPFLALPRSTKRALALLVDASLCVLTVWFAYCLRLDDWVILEGVEWLPAIVS
LLLAIPIFIVLGLYRAIFRYAGLSAFVTVVKAVAIYALAFMTVFTAISVPGVPRTVGILQ
PLLLLIAIGLSRMWTRYWLGNAYQRLLNRNQLGKVLVYGAGASGRQLTGALANSAELNVV
GYLDDDRNLHGSIMGGLPIYDPADLPALVVSGEIKGVLLALPNATRQRRNEILEDMRKAR
VTVRTMPDLTALAQGRVAVSDLRELDIEDLLGRNVIAPDRGLIEKNIRGKVVMVTGAGGS
IGSELCRQILKNGPSALLLIEQSEFALYAIHGELEKTAASAGYADIRIIPFLASVRDGQR
MRQIMQAWRPKTVYHAAAYKHVPLVEYNPAEGIRNNVQGTQIAAEAARDHGVENFVLIST
DKAVRPTNIMGASKRLAEMVLQAMDADRKPGTDSTNFAMVRFGNVLGSSGSVVPLFRQQI
RDGGPITLTHPDITRYFMTIPEASQLVIQAGAMSGGGDVFLLDMGEPVRIADLARRMVEL
SGLTVRDQDEPDGDIELEITGLRPGEKLYEELLIGDNPQPTSHPRIMQAKEDFLPWPELS
KRLAALEAALDENDIPLARAMLQNLVSGYTPSSEVVDLVYRERETDLTVDQPNLDNVAQL
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggtgcccgcggataaactcgttctgccgtttctggctttgccgcgctctaccaagcgt
gcgcttgcgctgctggtcgacgccagcctgtgcgtgctgacggtctggtttgcttactgt
ctccgcctcgacgattgggtcattctcgaaggcgtcgagtggctgccggccatcgtctcc
cttctgctcgccattccgatcttcatcgttctcggcctttatcgtgcgatcttccgctac
gccggtctttcggcgttcgtgacggtcgtcaaggcggtagcgatctatgcgctcgctttc
atgacggttttcaccgcgatcagcgtgccgggcgtgccgcgcacggtcggtatcttgcag
ccgctgctattgctgatcgcgatcggcctgtcgcgcatgtggacgcgctactggctcggt
aacgcctatcagcgccttctcaaccgcaatcagcttggcaaggtgctggtctatggcgcg
ggtgcttcggggcgccagcttacaggcgcccttgccaacagcgccgaactgaacgtcgtc
ggttatctcgacgacgatcgcaatctgcatggcagcatcatgggcggcctgccgatctac
gatcctgccgatctgccggcgctcgtggtttcgggcgagatcaagggcgtattgctcgcc
ctgccgaacgccacgcggcagcggcgcaacgaaatcctcgaagatatgcgcaaggcccgc
gtcacggtgcggaccatgcccgatctgacggcgcttgcgcagggccgggtcgcggtttcg
gatctgcgcgagcttgacatcgaagacctgctcggccgcaacgtgatcgctcccgaccgc
ggtctgatcgagaagaacattcgcggcaaggtcgtcatggtcaccggcgccggcggctcg
atcggcagcgaactctgccgccagatcctgaagaacggcccgtccgccctgctgctgatc
gagcagagcgagttcgccctttatgccatccatggtgagctggaaaagaccgccgcttcc
gccggttatgccgatatacggatcattcccttcctggcgtccgtgcgggatggccagcgg
atgaggcagatcatgcaggcctggcggccgaagaccgtctatcatgccgccgcctacaag
catgtgccgctcgtcgaatacaatcccgccgaaggcatccgcaacaatgtgcagggaacg
cagatagcggccgaggctgcgcgcgatcatggtgtcgaaaatttcgtcctcatcagcacc
gacaaggccgtacgcccgaccaacatcatgggcgcgagcaagcggctggcggaaatggtg
ctgcaggcgatggacgctgatcgcaagcccggcaccgacagtaccaatttcgccatggtg
cgcttcggcaacgtgctcggctcctccggttcggtcgtgcccctctttcgtcagcagatc
cgcgacggcgggccgatcacgctcacgcatcccgatatcacccgttatttcatgaccatt
cccgaggcgtcgcagcttgtgatccaggcgggcgcgatgtcgggcggcggcgacgtgttc
ctgctcgacatgggcgaaccggtgcgcattgccgatctcgcacgtcgcatggtggaactg
tccggtctgaccgtacgggatcaagacgagcctgacggcgatatcgagctcgaaatcacc
ggcctgcgaccaggcgagaagctctatgaagagctgttgatcggcgacaacccgcagccg
accagtcatccgcgcatcatgcaggccaaggaagactttctcccctggccggagctgtcg
aagcggcttgccgcactcgaggcggcgctggatgaaaacgacattcccctggccagagcc
atgctgcaaaatctcgtttccggctatacgccgagcagcgaagtggtcgatctggtctat
cgcgagcgcgagacggatctgacggtcgaccaaccgaaccttgataacgtcgcgcagcta
tag
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