Rhizobium tropici: RTCIAT899_CH02355
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Entry
RTCIAT899_CH02355 CDS
T02432
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
rtr
Rhizobium tropici
Pathway
rtr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
RTCIAT899_CH02355 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtr03400
]
RTCIAT899_CH02355 (mutS)
DNA repair and recombination proteins [BR:
rtr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
RTCIAT899_CH02355 (mutS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_I
MutS_III
MutS_II
MutS_IV
Motif
Other DBs
NCBI-ProteinID:
AGB69888
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Position
479715..482456
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AA seq
913 aa
AA seq
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MNERINASIDAFSAAELASEESRASATPMMEQYIEIKANNPGSLLFYRMGDFYELFFEDA
VDASRALGITLTKRGQHMGQDIPMCGVPVHAADDYLQKLIALGFRVAVCEQVEDPAEAKK
RGGKSVVRRDVVRLVTPGTITEEKLLSPSESNYLMALTRIRGGAEPQLALAWIDISTGVF
RLAETEASRLLADILRIDPRELILPDTMFHDPELKPVFDILGRTAVPQPAVLFDSASAEG
RITRYFGVSTLDGFGTFSRAELAAAAAAIAYVEKTQLAERPPLGLPERESGASTLFIDPA
TRANLELVRTLSGDRNGSLLKAIDRTVTGGGARLLAERLMSPLTDPVRINERLDSIGFLT
EEPSLCSDLRAALKHVPDMPRALSRLALDRGGPRDLWAIRQGLAAAADLARMLGPALLPQ
ELKAALTGLVALPADLEAMLAATLADELPLLKRDGGFLREGANAELDEVRALRDQSRRVI
AGLQLQYAEETGIKSLKIKHNNVLGYFIEVTAGNAGPMTDTSEAKARFIHRQTMANAMRF
TTTELADLESRIANAADKALAIELKAFDRMVAAVVAAAEAIKAGARALSVIDVAAGLALL
AEEQAYCRPIVDGSRMFAIEGGRHPVVEQALRRQAGGPFVANNCDLSPKSDGKDGAIWLL
TGPNMGGKSTFLRQNALIAILAQMGSFVPAASAHIGIVDRLFSRVGASDDLARGRSTFMV
EMVETAAILNQATERSLVILDEIGRGTATFDGLSIAWAAVEHLHEANRCRGLFATHFHEL
TVLSEKLGRLSNATMRVKEWDGDVIFLHEVGPGAADRSYGIQVARLAGLPASVVARARDV
LTRLEDADRKNPASQLIDDLPLFQVAVRREEAVGRREPSKVEERLKTLDLDDLTPRAALD
VLYELKKTLNKTG
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgaacgtattaacgccagcatcgatgctttctcggccgccgagcttgcctcggag
gaaagccgcgcctcggccactccgatgatggagcaatatatcgagatcaaggcgaacaat
cccggttcgcttctgttctaccgcatgggcgacttctacgagctgttcttcgaagacgcc
gtcgatgcctcgcgtgcgctcggcatcacgctgacgaagcgcggccagcacatggggcag
gatatccccatgtgcggcgtgcctgttcatgccgccgatgattatctgcaaaagcttatc
gcccttggcttccgcgtcgccgtctgcgagcaggtggaagatccggctgaggcaaagaag
cgcggcggcaaatcggtggtgcggcgcgatgtcgtgcgtctggtgacgccaggtacgatc
accgaagaaaaactgctttcgccctccgaatccaactatctgatggctctgacacgcatt
cgcggcggtgccgagccgcagctggcgctcgcctggatcgatatttcgactggtgtcttc
cgcctggcggagacggaagcctcaaggctgctcgccgatatcctgcgcatcgatccgaga
gagttgatcctgccggatacgatgttccacgatccggaattgaagccggttttcgacatt
ctcggccgcacggcagtcccgcagccggccgtgctgttcgacagtgccagcgccgagggt
cgcatcacccgttatttcggcgtctcgacgctggacggtttcggcacctttagccgggcc
gaactcgccgctgcggcagcggcgattgcctatgtcgagaagacccagcttgccgagcgt
ccgccgctcgggttgccggagcgcgaaagcggcgcttcgacgctcttcatcgatcccgcg
acccgcgccaatctggaactggttcgcacactctccggtgatcgcaacggctctctcctg
aaggcgatcgatcgcaccgtcaccggcggcggcgcacgccttctcgccgaacggctgatg
tcgccgctgaccgaccctgtccgtatcaacgagcgtctggattcgatcggttttctgacc
gaggagccgtcgctgtgcagcgatctgcgtgcggcattgaagcatgtgcctgacatgccg
cgcgcattgtcgcgcctcgcactcgatcgtggcggcccgcgcgatctctgggcgatccgc
caggggctggccgcagcagccgatctcgcccgcatgctcggacctgcacttctgccgcaa
gagctgaaggctgcattgaccgggctcgttgccttgcccgccgatcttgaagccatgctc
gccgcgacacttgccgacgagctgccgttgctgaaacgcgacggcggtttcttgagggaa
ggggcgaatgccgagctcgacgaagtgcgggcactccgcgatcaatcacgccgtgtcatc
gccggcctgcagctgcaatatgccgaggaaaccggcatcaaatcgctgaagatcaagcac
aataatgtgctcggctacttcatcgaggtcacggccggcaatgcgggtccgatgacggat
acgagcgaagccaaagcgcgcttcatccatcgccagaccatggcgaatgccatgcgtttc
accacgacggaacttgccgatctcgaaagccgcatcgccaatgccgccgacaaggcgctg
gcaatcgagctcaaggccttcgaccgcatggtcgcagccgtggtggccgctgccgaggcg
atcaaagcgggcgcccgcgcgctgtcagtgatcgatgtcgcagccgggcttgcgctcctt
gccgaggaacaggcctattgccgacccatcgtcgatggcagccgcatgttcgccatcgag
ggcggccgccatccggtggtggagcaggcgctacgccgtcaggccggcggtccgttcgtc
gccaacaattgcgatctctccccgaaatccgatggcaaggatggcgcgatctggctgctg
accggcccgaacatgggcggtaagtcgaccttcctgcgccagaacgcgctgatcgccatt
ctcgcgcagatgggctccttcgtgccggccgcttccgcccatatcggcattgtcgaccgg
ctgttctcgcgcgtcggcgcttccgacgatctggcccgaggccgttcgaccttcatggtc
gagatggtcgagacggccgcgattctcaatcaggcgacggaacgctcgcttgttattctc
gatgagatcggtcgcggcaccgcgaccttcgacggcctttccatcgcctgggcagccgtc
gagcatctgcacgaggccaatcgatgccgcggcctcttcgccacccatttccatgaactc
accgtgttatcggaaaagctggggcggctttccaatgccaccatgcgcgtcaaggaatgg
gatggcgacgtcatcttcctgcacgaggtcgggccgggggctgccgatcgctcctatggc
atccaggtggcgcgtctcgccggcctgccggcttccgtggtggcgcgcgcccgcgacgtt
ctgacgcggcttgaagatgccgaccgcaagaatccggcaagccagctcatcgatgatctg
ccgctgttccaggtggcggtccgtcgggaggaggcggtcggccggcgcgaaccctccaag
gtcgaggaacggctgaagacgctcgatctcgacgatctgacgccgcgagccgccctcgac
gtgctctacgagctgaagaagaccctcaacaagaccggctga
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