Rhizobium tropici: RTCIAT899_CH03060
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Entry
RTCIAT899_CH03060 CDS
T02432
Name
(GenBank) fatty acid oxidation complex subunit alpha
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
rtr
Rhizobium tropici
Pathway
rtr00071
Fatty acid degradation
rtr00280
Valine, leucine and isoleucine degradation
rtr00310
Lysine degradation
rtr00362
Benzoate degradation
rtr00380
Tryptophan metabolism
rtr00410
beta-Alanine metabolism
rtr00640
Propanoate metabolism
rtr00650
Butanoate metabolism
rtr00907
Pinene, camphor and geraniol degradation
rtr00930
Caprolactam degradation
rtr01100
Metabolic pathways
rtr01110
Biosynthesis of secondary metabolites
rtr01120
Microbial metabolism in diverse environments
rtr01200
Carbon metabolism
rtr01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
rtr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
RTCIAT899_CH03060
00650 Butanoate metabolism
RTCIAT899_CH03060
09103 Lipid metabolism
00071 Fatty acid degradation
RTCIAT899_CH03060
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RTCIAT899_CH03060
00310 Lysine degradation
RTCIAT899_CH03060
00380 Tryptophan metabolism
RTCIAT899_CH03060
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
RTCIAT899_CH03060
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
RTCIAT899_CH03060
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RTCIAT899_CH03060
00930 Caprolactam degradation
RTCIAT899_CH03060
Enzymes [BR:
rtr01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
RTCIAT899_CH03060
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
RTCIAT899_CH03060
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
RTCIAT899_CH03060
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
DAO
NAD_binding_2
NAD_binding_7
UDPG_MGDP_dh_N
NAD_binding_8
2-Hacid_dh_C
Pyr_redox
FAD_binding_3
F420_oxidored
Pyr_redox_2
ApbA
GIDA
ThiF
Motif
Other DBs
NCBI-ProteinID:
AGB70026
LinkDB
All DBs
Position
621382..623592
Genome browser
AA seq
736 aa
AA seq
DB search
MAYTNFTVETDADGIALVTWDMPGKSMNVFTAEILEELNAIIDATVADAAVKGVVFTSGK
SSFSGGADLSMIKSMFSFYQEEKAKDPAAATKKLFDLVGRMTGLFRKLETCGKPWVSAIN
GTCMGGAFELSLACHGRVASSAKGVKIALPEVKVGIFPGAGGTQRIARLTDAQSALQMMT
TGQSLTAARAKAMNLLHQVVEPDQLIPAAKQMIKDGLKPVALWDEKGFKAPGGGIWTPAA
AQLWPAAPAILRRETSGNYPAALAILKCVYEGLQVPFDTGLKIEQRYFTHVLQTTEAYSM
IRSLFISMQELGKGARRPTGQPKTELKKVGVVGAGFMGASIAYVTAAAGIPVTLIDRDIE
AATKGKGVGEGLVKDSIGKGRLTQDEGAALLSRITPSADYSDLKDADLVIEAVFEDREVK
KAVIEAVEAVLPAGAVFASNTSTLPITGLAKNSKRPADFIGVHFFSPVEKMMLTEVILGK
ETGDHALAVALDYVAAIKKTPIVVNDTRGFFVNRCVFRYIHEAYDMLIEGVPAAMIENAA
KMAGMPVGPLALNDEVAIDLSYKILKATVADLGEKAVDPRHMQLVTGLVEREGRLGRKNS
KGFYDYPPKPAKKSLWPGLKDLYPQKKADEVDVNVLKQRFLVTIALEAARTIEEGIVTDP
READVGSILGFGFAPYTGGALSYIDGMGVKAFVELCEKLTAAYGPHFQPTALLKDMAAKG
ETFYGRFDPYRAAKAA
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggcttacacgaatttcaccgtcgaaaccgacgcagacggcatcgcgctcgtcacctgg
gacatgcccggcaagtcgatgaacgtcttcaccgccgagatcctggaagagctgaacgcc
atcatcgacgcgaccgtcgccgatgcggccgtcaagggcgtggtcttcacctctggcaag
tcctccttctccggcggtgccgatctgtcgatgatcaagtcgatgttctctttctatcag
gaggaaaaggcgaaagacccggccgctgccacgaagaagctcttcgatcttgtgggacgc
atgactggcctcttccgcaagctcgagacctgcggcaagccgtgggtttcggcgatcaac
ggcacctgcatgggcggcgctttcgagctgtcgctcgcctgccatggccgtgtcgcttcc
agcgccaagggcgtcaagatcgcgctgcccgaggtcaaggtcggcatcttccccggtgcc
ggcggcacgcagcgcatcgcgcgcctgacggatgctcagtccgcactgcagatgatgacg
acgggccagtcgctgacggcagcacgcgccaaggcgatgaacctcttgcatcaggtggtc
gagccggatcagctgatcccggccgccaagcagatgatcaaggatggcttgaagcctgtg
gcactctgggatgaaaagggcttcaaggcgccgggcggcggcatctggacgccggccgca
gcccagctctggccggcagcgcctgccatcctgcgccgcgagacctcgggcaactatccc
gctgcgctcgccattctcaaatgcgtctatgaaggcctgcaggttcccttcgataccggc
ctgaagatcgagcagcgctatttcacgcatgtgctgcagaccaccgaagcctattcgatg
atccgctcgctgttcatctccatgcaggaactcggcaagggcgcgcgccgcccgaccggc
cagccgaagacggagctcaagaaggtcggtgtcgtcggcgccggcttcatgggtgcgtcc
atcgcctatgtcaccgccgccgcgggcattcccgtcacgctcatcgaccgcgacatcgaa
gccgcgacgaagggcaagggcgtcggcgaagggctggtcaaggattcgatcggtaaggga
aggctgacgcaggatgagggcgcggctctgctctcccgcatcacgccttcggccgattat
tccgatctcaaggatgccgatctcgtcatcgaagcggtgttcgaggatcgcgaagtcaag
aaggccgtcatcgaggccgtcgaggccgtgctgccggccggcgccgtcttcgcctccaac
acctcgactctaccgatcacaggccttgccaagaattccaagcgcccggccgatttcatc
ggcgtccacttcttctcgcctgtggagaagatgatgctgaccgaagtcatcctcggcaag
gagaccggcgatcatgcgctggccgtcgcgctcgattacgtcgcggccatcaagaagacg
ccgatcgtcgtcaacgacacgcgcggcttcttcgtcaatcgctgtgtcttccgctacatc
cacgaagcctatgacatgctgatcgaaggcgtgccggctgcgatgatcgagaatgccgcc
aagatggccggcatgcccgtcgggcctctggcgctgaacgacgaagtcgccatcgacctc
tcctacaagatcctgaaggcgacagtcgccgatctcggcgagaaggctgtcgatccgcgt
catatgcagctcgtcaccggtctcgtggagcgtgagggacgcctgggccgaaaaaactcc
aaggggttttacgactatccgccgaagccggcgaagaagtcgctatggccgggcctcaag
gatctctatccgcagaagaaggccgacgaggtcgatgtcaacgtgctgaagcagcgcttc
ctcgtgaccatcgcactggaggctgcccgcaccattgaagaaggcatcgtcaccgatccg
cgcgaggccgatgttggctccatcctcggcttcggctttgcgccctataccggcggcgcg
ctgtcctacatcgacggcatgggcgtgaaggctttcgtggaactctgcgaaaagctgaca
gctgcctacggcccgcatttccagccgaccgcgctgctgaaggacatggccgcgaagggt
gagaccttctacgggcgcttcgatccctaccgcgccgcgaaagccgcgtaa
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