Rhizobium tropici: RTCIAT899_CH03140
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Entry
RTCIAT899_CH03140 CDS
T02432
Name
(GenBank) ATP-dependent DNA helicase protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rtr
Rhizobium tropici
Pathway
rtr03420
Nucleotide excision repair
rtr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RTCIAT899_CH03140
03430 Mismatch repair
RTCIAT899_CH03140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtr03400
]
RTCIAT899_CH03140
Enzymes [BR:
rtr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RTCIAT899_CH03140
DNA repair and recombination proteins [BR:
rtr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RTCIAT899_CH03140
MMR (mismatch excision repair)
Other MMR factors
RTCIAT899_CH03140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
HHH
RecR_HhH
HHH_5
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AGB70042
LinkDB
All DBs
Position
complement(640024..642093)
Genome browser
AA seq
689 aa
AA seq
DB search
MTAAYLEKLNPEQRLAVEHGTTAGDGHIAGPLLVIAGAGSGKTNTLAHRVAHLIVRGADP
RRILLMTFSRRAAAEMGRRVERICREVLGANSGITADALAWTGTFHGIGARLLRDYAEQI
GIDPAFTIHDREDSADLMNLARHDLGFSKTENRFPTKATCLAIYSRSVNAEAPLDGVLRD
FFPWCAMWEQQLRDLFACYVEAKQVQNVLDYDDLLLYWAHMLQEPLIAEDIGSRFDHVLV
DEYQDTNRLQSSILLALKPDGRGLTVVGDDAQSIYSFRAATVRNILDFPKAFTPSADIVT
LDRNYRSTQPILAAANAVIDLASERFTKNLRTERQSMERPRLVTVRDEADQARYIADQIL
ENREGGARLKQQAVLFRTSSHSGPLEVELTRRNIPFVKFGGLKFLDSAHVKDMLAALRFA
QNPRDRVAGFRLMQLLPGVGPSTAQRVLDQIGEEASPITALTELPPPPRTGDDWTAFVET
MREVKSGKAGWPAEIGLVRQWYEPHLERVHEDASTRQADLIQLEQIAAGYGSRERFLTEL
TLDPPDATSDQAGVPLLDEDYLILSTIHSAKGQEWTKVFILNAVDGCIPADLAVGSSAEI
EEERRLLYVAMTRAKDNLDLVIPQRFFVHGQHAQGDKHVFASRTRFIPATLLQFFEVCGW
PQARAESAAAIRAREVRVDVGARMRGMWR
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccgcctatctggaaaagctgaacccggagcaacggctggcggtggaacacggc
acgactgcaggcgacggtcatattgccgggcctctgcttgtcatcgccggagctggctcc
ggcaagacgaatacgcttgcgcatcgtgtcgcgcatctgatcgttaggggtgccgatccg
cgccgcatcctgctgatgaccttttcgcgccgcgccgccgccgaaatgggccgccgcgtc
gagcgtatctgccgcgaggtgctgggtgcgaattccggcattaccgccgatgcacttgcc
tggaccggcacgttccatggcatcggcgcgcgcctgctgcgggattatgcagaacagatc
ggcatagacccggccttcacgatccacgaccgggaagacagcgccgacctgatgaatctg
gcgcgccatgatctcggcttctcgaaaacagagaaccgcttcccgaccaaggcgacctgc
cttgccatctattcgcgctccgtcaacgcggaagcgccgctggacggcgtgctgcgcgac
ttcttcccatggtgcgccatgtgggagcagcagctgcgcgatcttttcgcctgttatgtc
gaggcaaagcaggtgcagaacgtactcgattacgacgacctgctgctctattgggcgcat
atgctgcaggagcctctgatcgccgaggatatcggcagccgcttcgatcatgtgcttgtc
gacgaatatcaggacaccaacaggctgcagtcctccatcctgctcgccctgaagccggat
ggccgcggattgaccgtcgtcggcgacgacgcgcaatcgatctattccttccgcgccgcc
accgtacgcaacattctcgatttccccaaggccttcacgccctctgccgatatcgtgaca
ctcgaccgcaattaccgctcgacacagccgatcctggcagcagctaacgccgtgatcgat
cttgcctccgagcgcttcaccaagaacctgcgcaccgagcggcagagcatggagcgcccg
cggctggtaacggtgcgcgacgaggccgatcaggcgcgctacatcgccgatcaaatactg
gaaaatcgcgagggcggcgcaaggctgaagcagcaggcggtgcttttccgcacttcgagc
catagcggcccgctggaagtggaactcacccggcgcaacattcccttcgtcaagttcggt
ggattgaaattcctcgatagtgctcatgtcaaggacatgctggcggcgctgcgtttcgcc
cagaacccgcgcgaccgtgtggcggggttccgcctgatgcagctcctgcccggcgtcggc
ccctcgacagcccagcgcgtactcgaccagatcggcgaagaggcaagcccgatcacggcg
ctcaccgaactcccgccgccaccgcgcacgggagacgattggaccgcctttgtcgagacg
atgcgggaggtcaaaagcgggaaggccggctggccggcggaaatcggcctcgttcgccaa
tggtacgagccacatctggaacgcgtacatgaggatgcatcgacccgccaggcggatctc
atccagctcgaacagattgccgctggctacggctcgcgcgagcgcttcctcaccgagctg
acgctcgatccgcccgacgccaccagcgaccaggcgggtgtgccgctgctcgatgaggac
tatctgatcctctccaccatccattccgccaaggggcaggaatggacgaaggtcttcatc
ctcaacgccgtcgacggctgcatccccgccgatctcgccgtcggatcttcagccgaaatc
gaggaggaacgacggttgctctacgtcgccatgacgcgggcgaaggacaatctcgatctc
gtcattccgcagcggttcttcgtgcacggccagcatgcgcagggcgacaagcatgtcttc
gcatcgcgcacgcgcttcattccagcaaccttgctgcagtttttcgaggtctgcggctgg
ccgcaggcgcgtgccgaaagcgctgccgccattcgggcgcgcgaggtgcgcgtcgatgtg
ggtgcgcgcatgcggggcatgtggcggtga
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