Rhizobium tropici: RTCIAT899_CH03955
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Entry
RTCIAT899_CH03955 CDS
T02432
Symbol
groEL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rtr
Rhizobium tropici
Pathway
rtr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RTCIAT899_CH03955 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtr03019
]
RTCIAT899_CH03955 (groEL)
03110 Chaperones and folding catalysts [BR:
rtr03110
]
RTCIAT899_CH03955 (groEL)
03029 Mitochondrial biogenesis [BR:
rtr03029
]
RTCIAT899_CH03955 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtr04147
]
RTCIAT899_CH03955 (groEL)
Enzymes [BR:
rtr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RTCIAT899_CH03955 (groEL)
Messenger RNA biogenesis [BR:
rtr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RTCIAT899_CH03955 (groEL)
Chaperones and folding catalysts [BR:
rtr03110
]
Heat shock proteins
HSP60 / Chaperonin
RTCIAT899_CH03955 (groEL)
Mitochondrial biogenesis [BR:
rtr03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RTCIAT899_CH03955 (groEL)
Exosome [BR:
rtr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RTCIAT899_CH03955 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
RTCIAT899_CH03955 (groEL)
Exosomal proteins of breast cancer cells
RTCIAT899_CH03955 (groEL)
Exosomal proteins of colorectal cancer cells
RTCIAT899_CH03955 (groEL)
Exosomal proteins of bladder cancer cells
RTCIAT899_CH03955 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AGB70204
LinkDB
All DBs
Position
complement(811385..813025)
Genome browser
AA seq
546 aa
AA seq
DB search
MAAKEVKFGRSAREKMLRGVDILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEI
ELEDKFENMGAQMVREVASKTNDVAGDGTTTATVLAQAIVREGAKAVAAGMNPMDLKRGI
DLAVAEVVKDLQAKAKKINTSEEVAQVGTISANGEKQIGLDIAEAMQKVGNEGVITVEEA
KTAETELEVVEGMQFDRGYLSPYFVTNPEKMIADLEDAFILLHEKKLSNLQAMLPVLEAV
VQTGKPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEDLGIKLESVTLDMLGRSKKVSISKENTTIVDGAGAKSDIEGRVAQIKAQIEETTSDY
DREKLQERLAKLAGGVAVIRVGGSTEVEVKEKKDRIDDALNATRAAVQEGIVPGGGIALL
RSSTKITAKGENQDQEAGVNIVRRALQSLVRQIAENAGDEASIVVGKVLDKNEDNYGYNA
QTSEYGDMIAMGIVDPVKVVRTALQNAASVASLLITTEAMIAELPKKDAPAGMPGGMGGM
GGMDMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagaagtaaaattcggccgcagcgcccgcgaaaagatgcttcgtggcgtc
gatatcctcgctgacgcagtgaaggtcaccctcggcccgaagggtcgtaacgtcgttatc
gacaagtccttcggcgctccgcgcatcaccaaggacggcgtttccgtcgccaaggaaatc
gaactcgaagacaagttcgaaaacatgggcgcccagatggtccgcgaagttgcttcgaag
accaacgacgtcgccggtgacggcaccaccactgcaaccgttctcgcccaggcgatcgtt
cgcgaaggcgccaaggctgttgcagccggcatgaatccgatggacctgaagcgcggtatc
gacctcgctgttgcagaagtcgtcaaggatctccaggctaaggccaagaagatcaacact
tcggaagaagttgcgcaggtcggcacgatctccgcaaacggcgaaaagcagatcggtctc
gatattgctgaagccatgcagaaggtcggcaatgaaggcgtcatcacggttgaagaagcc
aagaccgccgaaaccgaactcgaagtcgtcgaaggcatgcagttcgaccgcggctacctc
agcccctacttcgtaaccaacccggaaaagatgatcgccgacctcgaagacgcgttcatc
ctgctccacgagaagaagctctcgaacctgcaggccatgctcccggttctcgaagccgtc
gttcagaccggcaagccgctcctcatcatcgctgaagacgtcgaaggcgaagctcttgcg
accctcgtcgtcaacaagctgcgcggcggcctcaagatcgctgccgtcaaggctccgggc
ttcggtgatcgccgcaaggccatgctggaagacatcgccatcctgacgggcggcactgtc
atctccgaagacctcggcatcaagcttgagtccgtcaccctcgacatgctcggccgttcc
aagaaggtttcgatctccaaggaaaacaccacgatcgtcgacggcgctggcgccaagtcc
gacatcgaaggccgcgttgcccagatcaaggctcagatcgaagaaaccacctccgactac
gaccgcgagaagctgcaggaacgtcttgccaagctcgctggcggcgttgccgtgatccgc
gttggcggctcgacggaagtcgaagtgaaggaaaagaaggaccgcatcgacgacgctctc
aacgcgacgcgcgctgctgttcaggaaggtatcgtaccgggcggcggtatcgccctcctg
cgttcttccacgaagatcactgccaagggtgaaaaccaggatcaggaagccggcgtcaac
atcgttcgccgtgccctgcagtcgctggttcgccagatcgcagaaaacgctggtgacgaa
gcttcgatcgttgtcggcaaggttctcgacaagaacgaagacaactacggctacaacgcc
cagacgtctgaatatggcgacatgatcgccatgggcatcgtcgacccggtcaaggttgtt
cgtacggctctgcagaacgcagcttcggttgcttcgctgctgatcaccaccgaagccatg
atcgctgaactgccgaagaaggatgcccctgctggcatgccgggcggcatgggcggcatg
ggcggcatggacatgatgtga
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