Rhizobium tropici: RTCIAT899_CH04050
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Entry
RTCIAT899_CH04050 CDS
T02432
Name
(GenBank) 3-deoxy-D-manno-octulosonic-acid transferase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
rtr
Rhizobium tropici
Pathway
rtr00540
Lipopolysaccharide biosynthesis
rtr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rtr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
RTCIAT899_CH04050
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rtr01005
]
RTCIAT899_CH04050
Enzymes [BR:
rtr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
RTCIAT899_CH04050
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
RTCIAT899_CH04050
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
RTCIAT899_CH04050
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
RTCIAT899_CH04050
Lipopolysaccharide biosynthesis proteins [BR:
rtr01005
]
Lipid A
RTCIAT899_CH04050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Motif
Other DBs
NCBI-ProteinID:
AGB70223
LinkDB
All DBs
Position
832433..833752
Genome browser
AA seq
439 aa
AA seq
DB search
MSSLRARLALSAYRFGGIAVYPFIGPYLAVRAAKGKEDGSRRLERSGYASANRPQGPLIW
FHAASVGETSAVIPLIREIRRRDIHVILTTGTITSAKVAHQRLGDEVIHQYVPLDLKPAI
KRFLDYWQPDCAIFAESEIWPTTIMELGRKRIPQILVNARMSDRSFARWSRHPSLAEALF
ENLALVVAQSDLDAERFRDLGALQVLKSGNLKVDTDAPSYDAPTLAAYMKQVGDRKTWAA
VSTFEGEEGAAATVHSMLKEHNGQLTILVPRHPERCDAIEAMLVEQGLKVARRTRNDILS
PDVDVFLGDTIGEMGLYLRMTEVAFMGKSLFNEGGQNPLEPAMLGCAILTGGHVQNFRDS
YQLLARRGSARMVRDTEMLARGVHYLLTNDTARRGMIDAGFAAVHEMRGALAATVKGLEP
YINPLSVKARLMPKTMANG
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcctcagggcgcgtcttgccttgagcgcctatcgtttcggcggaattgccgtt
tatccgttcatcgggccttatctcgccgttcgcgcggcgaagggcaaggaagatggctcc
cgcaggctggagcgctcgggttatgccagcgccaatcgcccgcagggaccgttgatctgg
ttccatgccgcaagcgtcggcgaaacctcggccgtcattccgctgattcgagaaatccgt
cgccgcgatatccatgttatcctgacgacgggcacgatcacctctgccaaggtcgcgcat
cagcgccttggcgacgaggtaatccatcaatacgttccccttgatctcaagcctgccatc
aagcggttcctcgattattggcagcccgattgcgccattttcgccgaatccgagatctgg
ccgacaacgatcatggagcttggccgcaagcgcattccgcagattctggtcaatgcccgc
atgtcggatcgatccttcgcgcgttggagccggcatccctcgcttgccgaggcgctgttc
gaaaatctggcactcgtcgtggcacagtccgacctcgatgccgagcgcttccgtgatctc
ggcgccctgcaggttctcaaatcaggcaatctcaaggtcgatacagacgcgccgtcctat
gacgcgccgacgcttgccgcctacatgaagcaggtcggcgaccgcaagacctgggcagct
gtctccaccttcgagggcgaggagggtgctgcagccaccgtccattcgatgctcaaggag
cataacggtcagctcaccatcctcgtgccacgccatcccgagcgctgcgatgcgatcgag
gcgatgctggtcgaacagggcctgaaagtggcgcgccgcacccgcaacgacatcctttcg
cccgatgtcgatgtcttccttggcgatacgatcggcgagatggggctttacctgcggatg
acggaagtcgccttcatgggcaaatcgctgtttaacgaaggtggtcagaacccgcttgag
ccggccatgctgggctgcgcgatcctgacgggcggccatgtccagaatttccgtgactcc
tatcagttgctcgcccgccgcggcagcgcccgcatggtgcgcgataccgagatgctggcg
cgcggcgtgcattatttgctcactaacgacacggcacgacgcggtatgatcgacgccggc
ttcgcagccgtgcatgaaatgcgaggcgcgctggccgcaacggtcaagggcctggagccc
tatatcaatccgctttcggtcaaggcgcggctgatgccgaagacgatggcgaacggataa
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