Rhizobium tropici: RTCIAT899_CH04390
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Entry
RTCIAT899_CH04390 CDS
T02432
Symbol
rrmJ1
Name
(GenBank) ribosomal RNA large subunit methyltransferase J
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
rtr
Rhizobium tropici
Brite
KEGG Orthology (KO) [BR:
rtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rtr03009
]
RTCIAT899_CH04390 (rrmJ1)
Enzymes [BR:
rtr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
RTCIAT899_CH04390 (rrmJ1)
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
RTCIAT899_CH04390 (rrmJ1)
Ribosome biogenesis [BR:
rtr03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
RTCIAT899_CH04390 (rrmJ1)
23S rRNA modification factors
RTCIAT899_CH04390 (rrmJ1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
SYY_C-terminal
S4_2
Methyltransf_25
Methyltransf_23
Methyltransf_11
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
AGB70290
LinkDB
All DBs
Position
complement(909201..909941)
Genome browser
AA seq
246 aa
AA seq
DB search
MSEPQRLDQLLVTLSLFASRSRARDAIQRGTVTVNGKIVTKPGALFTEDAQISIDDPAQD
YVSRAALKLVAALDHFDLDPRGQHCLDVGASTGGFTEVLLERGAAHVTAIDVGHDQMHPR
VEADPRVTNIEGLNARNLTAEDIGEPFSFIVSDVSFISLKLALAPALAIAEPGARAALLV
KPQFEAGRDAIGKAGLLKDPSSAPAVAAELERWFTEDMGWQSLGLIASPITGGDGNQEFL
LAGIKP
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaccacaacgcctcgaccagcttctcgtcaccctttcactcttcgccagccgc
tcgcgcgctcgcgatgcgatccagcgcggcacggtcaccgtgaacggcaagatcgtgacg
aagcccggggcactcttcaccgaagacgcacagatcagcatcgacgatccagcgcaggat
tatgtttcccgcgcggcgctgaagctggtggcggcgcttgatcatttcgacctcgatccg
cgcggacagcattgtctcgatgtcggcgcatcgaccggcggtttcaccgaggtgctgctt
gagcgaggcgctgcccatgtcacggcgatcgacgtcggtcacgaccagatgcatccgcgc
gtagaagccgatccgcgcgtgaccaatatcgaagggctgaatgcgcgcaatctgaccgcc
gaggacataggcgagcccttctccttcatcgtttccgatgtctcgttcatttcgctcaag
ctggctctcgcgccggcgcttgcgattgccgaacccggcgcgcgggcggcactgctggtg
aaaccgcaattcgaggcgggccgcgatgcgatcggcaaggccgggcttttgaaggacccc
tcctccgctccggcggtggcggccgagctcgagcgctggttcacggaagacatgggctgg
caaagcctcggcctcatcgcctcgccgattacaggcggcgacggcaaccaggaatttctt
ctcgcagggatcaagccatga
DBGET
integrated database retrieval system
