Rhizobium tropici: RTCIAT899_CH06455
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Entry
RTCIAT899_CH06455 CDS
T02432
Name
(GenBank) putative peptidoglycan-binding protein
KO
K21470
L,D-transpeptidase YcbB
Organism
rtr
Rhizobium tropici
Brite
KEGG Orthology (KO) [BR:
rtr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rtr01002
]
RTCIAT899_CH06455
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rtr01011
]
RTCIAT899_CH06455
Peptidases and inhibitors [BR:
rtr01002
]
Cysteine peptidases
Family C82
RTCIAT899_CH06455
Peptidoglycan biosynthesis and degradation proteins [BR:
rtr01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
RTCIAT899_CH06455
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
TAT_signal
Mu-transpos_C_2
Motif
Other DBs
NCBI-ProteinID:
AGB70698
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Position
1322796..1324109
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AA seq
437 aa
AA seq
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MSKKNGIGPFSRRSFLRSAATLGAAALAAPALAQNATPLEALINDRSRGNWDDQFDAKAA
ARTAAAVQSNAPILGPDSVPNIQQAIAQYQNIAANGGWPQINPTSQQALQLGATDPAVQS
LRQHLMITGDLPREAGISSAFDSYVDGAVKRFQARHGLPADGVLGDFTLKAMNIPANVRL
QQLNTNLVRLQTFPSDLGRRHVMVNIPATRVEAVEDGQVALRHQAIVGRESRPTHIINSK
IYEVILNPYWTAPRSIVVKDIVPLMRKDPTYLTKNNIRLIDGKGQEVAPETIDWNSDKAP
DLMFRQDPGKTNAMASTKINFYNPNNEYMHDTPEQGLFNKLMRFDSSGCVRVQNVRDLAT
WLLAETPGWPRQHIEQVISTRVNTPIKLATEVPVYFVYISAWSARDGIVQFRDDIYNLDG
NSQLALNTTQGMEQPVQ
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagaaaaacggaattggacccttttcgcgccgctctttcctgcggtcggctgca
actcttggcgctgccgcactggccgctccggcccttgcgcaaaacgcaactccgcttgag
gcgttgatcaacgatcgctcccgtggcaattgggacgaccagttcgacgccaaggctgcg
gcgcgcaccgctgccgccgtccagtcgaacgcgccaatcctcgggccagattccgtaccg
aacattcagcaggcgatcgcgcaatatcagaacattgccgccaacggcggatggccgcag
atcaatccgacaagccagcaggcgctgcagctcggtgcgaccgatccggccgtacagtcg
ctgcgccagcatttgatgattaccggcgacctgccgcgtgaggctggtatatcttctgcc
ttcgactcctatgtcgacggtgcggtcaagcgtttccaggcccgtcacggactgccggca
gatggcgtcctcggcgatttcacgctgaaggcgatgaacatccccgccaatgtccgcctg
cagcagctcaacaccaatctcgtccgcctccagacgttcccgtccgacctcggccgccgt
cacgtcatggtcaatatcccggcgacacgtgtcgaagccgtcgaggacggtcaggtggcg
ctgcgccaccaggcgatcgtcggccgggaatcgcggccgacgcatatcatcaattcaaag
atctacgaggtcatcctcaacccgtactggacggcgccgcgctccatcgtcgtcaaggac
atcgtgcccttgatgcgcaaggatccgacctacctgacgaagaacaacattcgtcttatt
gacggcaagggccaggaagtggcacccgagacgatcgactggaattcggacaaggcgccg
gacctgatgttccgtcaggacccgggcaagaccaacgccatggcgtccacgaagatcaac
ttctataatccgaacaacgaatatatgcacgacacgcccgagcagggcctgttcaacaag
ctgatgcgtttcgacagctcgggctgcgtgcgcgttcagaacgtgcgtgacctcgcgacc
tggctgttggccgaaacgcccggctggccgcgtcagcacatcgagcaggtcatttccacc
cgcgtcaacacgccgatcaagctggcgaccgaagtgcctgtctatttcgtctatatttcg
gcctggagcgcccgcgacggtatcgtccagttccgcgacgatatctataatctggacggc
aattcccagttggcgctcaatacgacccagggcatggaacagccggttcaataa
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