Rhizobium tropici: RTCIAT899_CH06460
Help
Entry
RTCIAT899_CH06460 CDS
T02432
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rtr
Rhizobium tropici
Pathway
rtr00260
Glycine, serine and threonine metabolism
rtr00460
Cyanoamino acid metabolism
rtr00630
Glyoxylate and dicarboxylate metabolism
rtr00670
One carbon pool by folate
rtr00680
Methane metabolism
rtr01100
Metabolic pathways
rtr01110
Biosynthesis of secondary metabolites
rtr01120
Microbial metabolism in diverse environments
rtr01200
Carbon metabolism
rtr01230
Biosynthesis of amino acids
rtr01240
Biosynthesis of cofactors
rtr04981
Folate transport and metabolism
Module
rtr_M00140
C1-unit interconversion, prokaryotes
rtr_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
rtr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RTCIAT899_CH06460 (glyA)
09102 Energy metabolism
00680 Methane metabolism
RTCIAT899_CH06460 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RTCIAT899_CH06460 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
RTCIAT899_CH06460 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RTCIAT899_CH06460 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
RTCIAT899_CH06460 (glyA)
Enzymes [BR:
rtr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
RTCIAT899_CH06460 (glyA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AGB70699
LinkDB
All DBs
Position
1324286..1325584
Genome browser
AA seq
432 aa
AA seq
DB search
MTNASTEPFFNRSLADTDPEIFGAIGKELGRQRHEIELIASENIVSRAVLEAQGSIMTNK
YAEGYPGKRYYGGCQYVDIAEELAIERAKKLFGVNFANVQPNSGSQMNQAVFLALLQPGD
TFMGLDLNSGGHLTHGSPVNMSGKWFNVVSYGVREGDNLLDMDEVQRKAEETKPKLIIAG
GTAYSRIWDWKRFREIADSVGAYLMVDMAHIAGLVAGGQHPSPFPHCHVATTTTHKSLRG
PRGGMILTNDEDLAKKFNSAVFPGLQGGPLMHVIAAKAVALGEALQPEFKDYAAQIVKNA
KALAETLISGGVDVVSGGTDNHLMLVDLRKKNATGKRAEAALGRAYVTCNKNGIPFDPEK
PFVTSGVRLGTPAGTTRGFKEAEFREIGNLIIEVLDGLKVANSDEGNAAVEAAVREKVVK
LTDRFPMYGYMG
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacgcgtccaccgaacccttcttcaatcgctcgcttgccgataccgatccggaa
atctttggtgcgatcggcaaggaactcggtcgccagcggcacgaaatcgaattgatcgcc
tcggaaaacatcgtctcgcgcgccgtgctggaagcgcagggctcgatcatgaccaacaaa
tatgccgagggatatccgggcaagcgctattatggcggctgccagtatgtcgatatcgcc
gaggagcttgccatcgagcgcgccaagaagctgttcggcgtcaatttcgccaacgtccag
ccgaattccggttcgcagatgaaccaggccgtgttcctggcgctcttgcagcccggtgac
accttcatgggtctcgacctgaattcgggcggtcacctgacgcatggttcgccggtcaac
atgtccggcaagtggttcaacgtcgtatcctacggcgtgcgcgaaggcgacaacctgctc
gatatggacgaagtgcagcgcaaggccgaggaaaccaagccgaagctcatcatcgccggc
ggcacggcctattcccgcatctgggactggaagcgcttccgcgagatcgccgacagcgtc
ggcgcctatctgatggtcgacatggctcatatcgccgggctcgttgccggcggccagcat
ccgtcgccgttcccgcattgccatgttgccaccacgaccacgcacaagtcgctgcgcggc
ccgcgcggcggcatgatcctcaccaacgacgaggatctggcgaagaagttcaactcggcc
gtcttccccggcctccagggtggcccgctgatgcatgtcatcgccgccaaagcggttgcg
ctcggtgaagcgctacagccggagttcaaggactacgcggcccagatcgtcaagaacgcc
aaggcgcttgccgaaacgctgatctccggcggcgtcgatgtcgtctccggcggcacggac
aaccacctcatgctggtcgatctgcgcaagaagaatgccacgggcaagcgcgctgaggcc
gcactcggccgcgcctacgtcacctgcaacaagaacggcattcccttcgaccccgagaag
cccttcgtcacgtcaggcgttcgcctcggcacgccggccggtacgacgcgcggcttcaag
gaagccgaattccgtgaaatcggcaatctgatcatcgaagtgctcgatggcttgaaggtc
gccaattccgacgaaggcaatgctgccgtcgaggctgccgtgcgcgagaaagtggtcaag
ctcaccgaccgcttcccgatgtacggctatatgggctaa
DBGET
integrated database retrieval system