Rhizobium tropici: RTCIAT899_CH06835
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Entry
RTCIAT899_CH06835 CDS
T02432
Symbol
rkpU
Name
(GenBank) capsular polysaccharide export protein RkpU
KO
K01991
polysaccharide biosynthesis/export protein
Organism
rtr
Rhizobium tropici
Pathway
rtr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rtr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RTCIAT899_CH06835 (rkpU)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtr02000
]
RTCIAT899_CH06835 (rkpU)
Transporters [BR:
rtr02000
]
Other transporters
Pores ion channels [TC:
1
]
RTCIAT899_CH06835 (rkpU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Poly_export
SLBB_2
SLBB
DprA_WH
Motif
Other DBs
NCBI-ProteinID:
AGB70773
LinkDB
All DBs
Position
1397112..1398290
Genome browser
AA seq
392 aa
AA seq
DB search
MFRIGAVICCVVLAGCNSVSSEGPLAGAIVKDAGQSSVELGRRNAAVFDIVDIDSRSARL
VSDYVSSTLNRRFGMGGGVGAVVIGVGDALKITIFEAGADGLFSTAQSKQVSLDVVVQPD
GTAAIPYAGSVRFAGKTLDQARKAILAALATKAVEPDVIVTSMGTPSRTVTVSGAVGRPS
MVPLDLTKEKITEVIAKAGGPSTQPYETYVTLVRGSRTGTVLLKSIIEHPSEDIYVQPGD
QIFLVRDPRTFTLLGSVRGDGRLEFGANDLNLLEAVALGHGAIDDSSNAKGFFLFRYEEP
EIAKALLGPARFEGLLRKGMVPDAKGRYPIVYRFDMSNPDSLIVGQTFPVKSRDVIYVSR
HPSVDIRKFLNLIGTPLGIASQGAATAANLGQ
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
ttgtttcgtattggcgccgtgatttgttgcgtggttcttgcggggtgcaattccgtctcc
agtgaaggccctttggctggcgccattgtaaaggacgccgggcaatccagcgtcgagctg
ggtcgcagaaatgctgcggtcttcgatatcgttgacatcgacagccgcagtgcgcgtctg
gtttccgattatgtttcatccacactcaatcgccgttttggtatgggtggtggtgttggc
gccgtcgttatcggtgtcggcgatgcactgaagatcacgattttcgaagccggcgccgat
ggcctgttttcgacggcgcaatcaaagcaggtatcgcttgatgtcgtcgtgcagccggat
ggcacggctgcaattccttatgccggctcggttcgatttgcgggcaagacgcttgatcag
gctcgcaaggcaatcctggcggcgctggcgaccaaggccgtcgagccggatgttatcgta
acgagcatgggcacgccgtcgcgtaccgtcacggtttcgggggccgttggccgtccttcc
atggttccgctcgatctgaccaaggaaaagattaccgaagtcatcgccaaggccggtggg
ccttcaacgcaaccttatgaaacctatgtaacgctggttcgcggcagccgaacgggaacg
gttttgctgaagtccatcattgagcatccgtcggaagatatctatgtccagccgggcgat
cagatcttccttgtccgcgatccgaggaccttcactctgcttggatctgttcgcggagac
ggccgcctagagtttggagcaaacgatctgaacctgctcgaggctgttgcgctgggtcac
ggcgcgatcgacgattcgagcaatgcgaaaggcttcttcctgttccgctacgaggagcct
gaaatcgccaaagccctgctcggtcctgctcgcttcgagggtttgctgcgtaagggaatg
gttccggatgccaagggacgctatccgatcgtctatcgcttcgacatgtccaatcccgac
agcctgatcgtaggtcagactttcccggtaaaaagccgcgacgtcatctatgtatcgcgt
catccttccgtcgacatcaggaagttcttgaatcttatcggtaccccgcttggtattgca
tcccagggagcggcaacggcggcaaatctggggcaatag
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