Rhizobium tropici: RTCIAT899_CH06840
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Entry
RTCIAT899_CH06840 CDS
T02432
Symbol
rkpA
Name
(GenBank) putative type I polyketide synthase RkpA
Organism
rtr
Rhizobium tropici
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ketoacyl-synt
Acyl_transf_1
KR
Ketoacyl-synt_C
ADH_zinc_N_2
ADH_zinc_N
PKS_DH_N
KAsynt_C_assoc
PS-DH
PP-binding
ADH_N
adh_short
Thiolase_N
RhiE-like_linker
CurL-like_PKS_C
Epimerase
GDP_Man_Dehyd
ACP_SdgA_C
Motif
Other DBs
NCBI-ProteinID:
AGB70774
LinkDB
All DBs
Position
1398616..1406076
Genome browser
AA seq
2486 aa
AA seq
DB search
MTVEIIGRASIAPGAGSIDELQLVLKEGRCTVSRIPEERWDLARFWHPAVGIQGKTYSFA
AGVFENVYAFDPAVFGLSQREAMQMDPQQRILLNVVWRALEDANLPIDGFEGQRVGVYVG
ASSLEYGNLTLEDPASGSPYFMTGNTLSIVSNRISHIFGLRGPSMTIDTACSSSLVALDQ
AVKALENGEIDTAIVGGINILLNPMSFVGFAQARMLSPEGLCRAYDDNGRGYVRAEGGAA
IVLRRTDVALREKDRSYARIHAVGVNSSGRTNGISMPSREAQAALLQSIYEGRNIDVNRI
AFIEGHGTGTKVGDPAEIWAIGEVIGRNRRAPVPIGSIKTNIGHTEPASGLFGLLKAVIA
LENNFLPASLHFDHPNESIDFEGLNVRVNTSTIELLPAKQARFAGINSFGFGGTNAHVVI
SDPDPIAPPEPSIRGEGVVFAVSAHTASALSTLLEDYRTRLETAEPKEARQIVASAAANR
EPMRHRFAARAKDSAAVLAAIDAHLAGRNSAGEAGEAPAQATKIAFVFSGNGAQWAGMGI
GAYQENRHFRQCFQSFSALFEYYLGEKLTDVLVASDLAARLADTKIAQPLLFAIQASLSD
CLWSMGVKPDAVFGHSVGEIAAAYAAKVLTAAEAVAIVAKRSLHQDLLAGEGKMAAVVLG
EDAALAFAKARGLDNICIAAVNAPNSVTISGPADEIEAYRDAARKSQIVAHVLDINYPFH
HPIIDRAREAFFADLPDLAPDSGTGTFISTVTGELRDGRLLDTQYWWRNVRDPVLFKAGC
QVALAMGCNLFIEISPRPILSNYVAEIAKQASVQAIAISTLLREAPVDGHDPVSQSFARA
VANGAPALRTRSSATRNAFVKLPPLPFEPVELRAHATTDEIDIFGRDRKSPYTLLGWRAD
LNGANWKNHLDARLFPDLAEHVVDGKAILPGSGFIEIAVTAAQRYYGTDEVEIANLEIFR
PLELSQDRMVELSTILSPETGDLEIRSRERLSHDEWTVHAVGRCRKPLAAEIDSRAAARS
SGDRKSMLTSEVAYETAERFGLHYGPHFQLLSKAVASGHHAIEVDLKPAASPSHPFASYN
LNPMSVDAAFHGLVALFDQFSGDETGAPYIPVHFGTVRAFGKERSIVKAFIEIERFSANS
IKARFTLFDAKGSAVAVLDDCRFRRTQLRRRATLDSVAFHYESVPSALFAGVHKSGANGR
QIPSYGSSGESHALNNASLLLEAAVYRACYDIALKVADRNGAVAFSGLPGDAEFRSFLVN
CLYILEDAGIAETGDGKWHVPLEPTLPPVAELLQEIYREDAGRVAESVLVGDAYRETLEH
LATIRPHVLEREPAAQGANIPGGATLEHVLVHSPLSERRLSMLAEALTSAIEADAGVIAY
VLEVGSVSAAFSRKLATITAAAGACLVIAEPREQVRRALEIAFERDAHVVVTDPAKLTDR
YVADLVVASGDQSQHLMLHNDDIKRAVRTIAAGDARLLLVDRAPSAFNDFVFGLSEGWFA
DSPSPEFPVGRLGTPQQIAELLGSLGFAKPLIREQVFPEGALIAVSAVSERQPEAAAIVE
TAEPILILSEQGKKGLGKLGENAKVIDLSALSTDIAGALDPVNRKTSRIVYLAGMKRGDA
AEFSLSRLSIFTELANLLSQHGDGARIRLVILAPGGSPLSARPVDDVNAGLWALGRVLQN
EYDAFDVHLLDADADDGRVFSAVDTLMTADTDNREWFMDRATGKVREIRVAAGPFDAVEA
SRRDFAAAMIRQHVGGRLDSVVWEEVGLTVPDEREIVVSVEATGLNFRDVMWAMGLLPEE
ALEDGFAGATIGMEFAGRILAVGDAVDDLKPGDKVMGIGPAAFSTHVRVHRDGVTKLPER
MDTVAAATVPVAFLTAYYAMIELGRIQPGETILIHGAAGGVGLAALQIAKHRGARVIATA
GTVEKRGFLEMLGADHVLDSRSLDFVSGVRRLTDGEGVDLVLNSLFSEAMERSIELVKPF
GRFLELGKRDYYSDRKIGLRPFRRNVSYFGIDADQLLVNVPDLTRRIFREIGQLFAEEKL
TPLPYRAFAYDEIGNAFRLMQNAGHIGKIVVRPPVAGVDSVLRAPAKSLRVDGKGVFLVA
GGIGGFGLSAADWLVSKGARRIALCSRRGIADAETKQAIADWAKRGAVTTLHACDITDAA
AVETLLASLRTEGALKGVIHAAMVLDDALLANLTPERNRPVLEVKIRGAENLDRLTRDDR
LELFLLFSSATTMLGNPGQANYVMANGYLEGLARSRRAADRPALAVGFGAIADKGFLARN
IEVNDLLSKRIGKAALKARDALEQVERYLLADRGDVDAAAVMIAEIDWNAARLLPIAGRS
LFEPLMRHAGSHQALNEGDSIDLRELIRGKSEEEAQAALHALVAAEIAAILRVTEDTVTP
DKVLKDIGLDSLMAMELGMSFQQKTGFDIPLSGVGEGTTVGDVVGRLRDRVMNRNGDNAA
SDMAGDEVVERLARSHAAEHEKRAVQ
NT seq
7461 nt
NT seq
+upstream
nt +downstream
nt
atgacagttgagattatcggacgcgcaagcattgcccctggggcgggttctatcgatgaa
ctgcagctcgtactaaaggaggggcgttgcaccgtaagccgtatacctgaggagcgctgg
gatcttgcgcgcttttggcatccggctgtgggcatccagggaaaaacttacagttttgca
gccggcgtcttcgagaatgtctacgcctttgatcctgcggttttcggcctttcccagcgt
gaagcgatgcagatggatccgcagcagcgcattcttctcaacgttgtctggcgagctttg
gaagatgcaaacctgccgatcgatgggttcgaaggccagcgcgtgggcgtctatgtcggg
gcatcttcccttgaatatggcaatctgacgctcgaggatcccgcctcgggtagcccgtat
tttatgactggaaacacgctttccatcgtttccaaccgcatctcgcatatattcggcttg
cgcgggccaagcatgacgatcgacactgcctgttcgtcgtcgctggtagcgctcgaccag
gcggtgaaagccctcgaaaacggagagatcgataccgcgatcgtcggcggcatcaatatt
ctgctcaaccccatgtccttcgtgggcttcgcgcaggcgcgcatgctatcgccggagggg
ctctgccgcgcctatgacgacaacggtcgcggttacgttcgcgcagaaggtggtgcggcg
atcgtattgcgccggacggacgttgcgctgcgcgagaaggaccgcagctatgccaggata
catgccgtaggcgtcaattcttcgggacgcaccaacggcatctccatgccgtcgcgtgag
gcgcaggccgccttgcttcagtcgatctatgaaggacgcaatatcgacgtcaatcgtatc
gccttcatcgaagggcatggaacgggaacgaaggtcggcgaccccgccgaaatctgggcg
atcggcgaggtcatagggcgcaatcggcgggcaccggtaccgatcggctcgatcaagacg
aatatcggccataccgaaccggcatccggtcttttcgggctgttgaaggctgtgattgcg
cttgaaaataatttcttaccggcctcattgcatttcgaccacccgaatgagtccatcgat
ttcgagggcctgaacgttcgggtcaatacatcaacgatcgagcttcttccggccaagcag
gcccgctttgccgggatcaattccttcggcttcggcggaacgaacgctcacgtcgtcatc
agtgaccccgatccgatcgcaccgcccgaaccgtcaatccgaggcgagggggtcgttttc
gccgtcagcgctcacacggcctcggctctttcgacactgctcgaagactacagaacccgt
cttgaaactgccgagcccaaggaagcgcgtcagatcgttgcttccgccgctgccaatcgc
gaacccatgcgtcatcgtttcgcagcccgcgcaaaagacagtgcagccgtgcttgccgcg
atcgatgcgcatcttgcagggagaaactccgctggcgaggctggcgaagctccggcccag
gccaccaagatcgccttcgtcttttccggcaacggcgcgcagtgggcgggaatgggcatc
ggcgcctatcaggaaaaccgccatttccggcaatgctttcagtctttcagcgctctcttt
gaatattatcttggcgagaagctgaccgatgttctggtcgcctctgatcttgctgcccgc
ctggccgataccaagatcgcacagccgctgctgttcgcgatccaggcctccctttcggat
tgtctctggtcgatgggcgtcaagccggacgcggtcttcggccactcggtcggcgaaatc
gcagccgcgtacgcagccaaggtgctgacggctgccgaggcggttgcaatcgtcgccaag
cgttcgctgcatcaggatcttcttgccggtgagggcaagatggccgccgttgtgcttggc
gaggatgcagcgctggcttttgcgaaagccaggggcctggacaatatatgtatcgcggcc
gtcaacgcgccgaattcggtaacgatctccggtcctgccgatgagatagaggcctacagg
gacgccgcgcgtaaatctcagatcgtcgcgcatgttctcgatatcaactatccattccac
catcccatcatcgaccgtgccagggaggcgtttttcgcagacctgcccgatctcgcgccg
gatagcggcactgggaccttcatctcgacggtaacaggcgaactgcgcgatgggcgcctg
ctggatacgcaatattggtggcgcaatgttcgcgatcccgtgcttttcaaagctggctgt
caggtcgccctggcaatgggctgcaatctctttatagaaatttcaccgcgcccgatcctg
tcgaactatgtcgcggagatcgcaaaacaggcatcggttcaggcaatcgcaatatcgact
ttgttgcgcgaggcccccgttgatggccatgatccggtctcacagtcatttgcacgggcg
gttgccaacggtgcgcctgcgctacgcacgcgcagtagcgccacgcgcaacgccttcgtc
aagctgccgcccctgcctttcgagccggtggagcttcgtgctcatgcgacgacggacgag
atcgatattttcggtcgcgaccgcaaaagcccgtatacgctgcttggctggcgcgccgat
ctcaatggtgcgaattggaagaaccacctcgacgcccgcctctttccagacctcgccgaa
catgtggtggatggcaaggcaatcctgcccggcagcggctttatcgaaatcgcagtaacg
gctgcgcagcgttattacgggactgatgaagtcgaaatcgccaatctcgaaatcttccgg
ccgctcgaattgtctcaggaccggatggtcgaattgtccaccattctgtcacccgagacg
ggagatctcgagatccggtcgcgcgagcgcctcagccatgacgaatggacagtgcatgcg
gtcggacgttgccgcaagccgctggcggcggagatagatagcagggccgccgcgcgatcg
agcggggaccgtaaatccatgttgacgtccgaggtggcctacgaaaccgcggaacgtttc
ggattgcattacggcccgcatttccaacttctgtcgaaagccgtggcgtctggtcatcat
gcgatcgaagtggacctgaagccggcggcctcgccgtctcatcccttcgccagctataat
ctcaaccccatgtctgtcgacgcggcctttcacggtctcgtcgcattgttcgatcaattt
tccggcgatgaaaccggcgctccctatattcccgttcactttggcaccgtgagagctttc
ggcaaggaaagatcgatcgtcaaagccttcatcgagatcgagcgtttcagcgcgaattcg
atcaaggcgcgtttcaccttgttcgatgcgaagggcagcgcggttgccgttcttgacgat
tgtcgtttccgccgcacgcagctgcgccgcagggcaacgctcgattccgttgcatttcat
tatgagagcgtaccttcggctcttttcgctggcgtacacaaatcgggcgctaacggacgg
cagattccgtcgtacggcagttccggcgagagccatgcgctcaacaatgcaagccttctt
ctcgaagccgcagtctatcgcgcctgctacgatatcgcgctaaaggttgcggaccgcaac
ggcgccgtcgcattttccggccttcccggcgatgccgaattccggtctttcctggtcaat
tgcctctacattctggaggatgccggcatcgctgagactggagacggcaagtggcacgtt
cccctggagccgacactgccgcctgtggccgagctgttgcaggaaatctatcgtgaggac
gctgggcgcgtggccgaaagtgttctcgttggcgatgcctatcgcgagacgctcgaacat
ctggcgacgatacggccgcacgtgttggaacgcgagcctgctgcccaaggggcaaacatt
ccgggtggggcaactctggagcatgtgcttgttcattcgcccttgagcgaacggcggctt
tcgatgctcgcggaagcattgacatccgccatcgaggccgatgccggcgtgatcgcatac
gttttggaagtcggctcggtttcggccgctttcagccgaaaactggcgacgatcaccgca
gcagcgggcgcatgtctcgtgattgccgaaccgcgtgaacaggtgcgccgagcactggag
atcgcattcgaacgcgatgcgcatgtcgtcgtcaccgatccggccaaactgacggatcgc
tatgtcgcggacctcgtggtcgcctccggcgatcagagccagcacctgatgcttcacaat
gacgatatcaagcgagctgtccggacgattgccgccggcgatgcgcggttgttgctggtc
gatcgtgcgccgagcgctttcaatgatttcgtcttcggcctttccgaaggctggtttgcc
gatagcccgtcgccggaattccccgttgggcggctcggcacaccgcagcagatcgcagag
ctcctggggagcttgggcttcgccaagccgctgatccgtgagcaggtattccccgaggga
gcgttgatagcggtatcggctgtatccgaacggcaaccggaagcagctgccatcgtagag
accgccgagccaatcctgatcttgtcggagcagggcaagaagggtcttggcaagctgggt
gagaatgcaaaggtcatcgatctcagtgcgttgtcgacagatattgccggcgctctcgat
ccggtcaaccggaaaaccagccggatcgtgtatcttgccggcatgaagcgcggcgatgcg
gcggaattctcactatcgcgtctctcgatcttcaccgaactggcgaacctgctgtcgcag
cacggcgatggagcacggattcgactggtgatcttggcgccgggcggctctccgctgtcg
gctcgccccgtcgacgacgtgaatgccggtttgtgggctttgggccgcgttcttcaaaac
gaatatgatgcctttgacgtccatctgctggatgccgatgcggatgacgggcgagtgttt
tccgcagttgataccctcatgacggcggacacggacaaccgcgaatggttcatggatcgc
gcgaccggaaaggtccgggagatcagagttgccgcaggtccctttgatgccgtcgaagca
agccgccgggattttgccgcggcgatgatccggcaacatgtaggcggtcgtctggatagc
gtcgtctgggaggaagtaggccttactgtgcctgacgagagggagattgtcgtctccgtc
gaagcgaccggcctcaatttccgcgacgtcatgtgggctatggggctcttgccagaggag
gcgctggaagacggctttgccggtgccaccattggtatggaattcgctgggcgaattctt
gccgttggcgatgccgtcgacgatctcaagccgggtgacaaggtgatggggatcgggcct
gctgcgttctcgacccatgtccgtgttcaccgcgatggagtgacgaagctccccgaacgg
atggacaccgttgcggctgcaaccgtgcctgtcgcttttctgaccgcctattatgcaatg
atcgagcttgggcgcattcagccgggtgaaaccatcctgattcatggagctgccggcggc
gtcggtctggcggcgctccagattgccaagcataggggtgccagggtgatcgccaccgcc
ggcacggtcgagaagcgtggcttcctcgaaatgctcggcgctgatcatgtgcttgattcc
cgctctctggatttcgtttccggcgtgcggcgacttacggatggcgagggtgtcgatctt
gtcctcaattcgctcttttccgaagcgatggagcggagcatcgagctggtcaagccattt
ggccgcttcctggagctcggcaagcgcgactattattccgaccgtaagatcggcctgcgc
ccgttccggcgcaatgtcagctatttcggtatcgatgcggatcagcttctggtcaacgta
cccgatctcactcggcgtatcttcagggagatcggtcagcttttcgccgaggaaaagctg
acaccgctgccatatcgcgccttcgcttatgacgagatcggcaatgccttccgtctgatg
cagaatgccggccatatcggcaaaatcgtggtgcggccgcccgttgcgggtgttgacagc
gtcttgcgcgcacccgcgaaatccctgcgtgtcgatggcaagggtgttttcctggtcgcg
ggcggcattggcggcttcgggttgtctgccgccgattggctcgtttcgaagggcgcgcgt
cgcatagcgctatgctcacgccgcggcattgccgatgctgaaacgaagcaggcgatagca
gattgggcaaagcggggtgccgttacgacgctgcatgcctgcgatatcaccgatgccgcc
gcggtcgagacgctgctcgcctcgctccgcaccgaaggggcgttgaagggtgtcattcac
gccgctatggtcctggacgatgcgctccttgccaacttgacgccggaacgcaaccgcccc
gttctcgaggtcaagattcgtggcgcagaaaatctggatcgtctgacacgagatgacagg
ctggaactcttcctcctattctcttcggcaacgaccatgctcggcaatcccggtcaggcc
aactatgtgatggcaaatggctatctggagggcctggcgcgctcacgtcgggccgcagat
aggcccgcgctcgctgtcggcttcggcgcgatcgccgacaagggcttccttgcccgcaac
atcgaggtcaatgatctcctctccaagcgtatcggaaaggcggcgttgaaggcacgcgac
gcgctggaacaggtcgagcgttatctgctcgcggacagaggggatgtcgatgcggcggcg
gtcatgatcgccgagatcgattggaatgcagctcgtttgctgccgattgccggacgttct
ctgttcgagccgttgatgcgccatgcaggcagccatcaggccctcaacgagggagacagc
atcgatctcagggaactgatcagaggcaaatcggaagaggaggctcaggccgctctgcat
gcgcttgtcgcggcagagattgcagccatcctgcgcgtgaccgaagacacggtgacgccc
gacaaggttttgaaggatatcggcctcgatagcctgatggctatggagctcggcatgagc
ttccagcagaaaaccggcttcgatattcctctgagcggcgtaggcgaggggacgacggtg
ggcgatgtcgtcggccgtttgcgtgatcgggtcatgaatcgcaacggcgataatgctgct
agtgacatggccggagacgaggtggtcgagcgcctggcgcgcagccatgccgcagaacac
gaaaaaagggccgtgcagtga
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integrated database retrieval system
